Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01230 ATGGCAACCACAACACCGGATGGGCTATATCCGCACAATGCCACCTCCTTTTGGGGTGTGCTACCACTGTTAATGGTGGTACTGGTCTGCGTGGGGTGTGTGCAAGGCGGCATCAACCCCAGTGCGAGCCCCTTCTGGAAATCCCTTTCCCAGCACGTGCACTGGTACTTGGGTTCTTCGTATTGCAACGCAACTGCCTCAGTCCTAGTCCCACCAGTGAATATGAATACCTATGCCGAAAGACCAACTAATGGGGAAGTTGAAGAAGACGATGATGAAGATGAAGTAAATGGTAACGCTCGTGCCTGGGAAAGAACTTATGCAGAAGATAGATCATGGGAGTCTTTGCAAGAAGACGAATCTGGGCTTCTTCGCCCCATTGATAATAAGGCCATTTACCATTCTCAGTATCGCAGGCGCCTTCGCGCCCTTGCTGCCACTGCAGCTGCTGCTCGAATTCAAAAGGGTCTCATTCGCTACCTATACGTTGTTGTTGACCTGTCCAAGGCAGCTTCAGAGACAGACTTTCGACCAAGTAGGATGGCTGTGATTGGGAAACAAGTTGAGGCTTTTATCAGGGAGTTCTTTGATCAGAATCCACTTAGTCATATAGGTTTGGTGACCATAAAAGATGGTATTGCTCATAGCTTAACAGAACTTGGTGGCAGTCCTGAGTCTCACATTAAAGCTTTGATGGGTAAACTGGAATGCTCTGGTGATGCCTCCCTACAAAATGCACTGGAGCTTGTTCATGGCTATCTAAACCAAATTCCATCATATGGTCATCGTGAAGTTCTAGTCTTGTATTCAGCTCTTAGTACATGTGATCCTGGTGATGTCATGGAAACCATCCAAAAATGCCAAAAAAGTAAAATAAGGTGCTCTGTCATTGGTCTTGCCGCTGAAATGTTTATATGCAAACATCTCTGCCAAGAAACTGGTGGAATGTACACTGTTGCGTTGGATGAGGCTCACTTTAAAGAGTTGATTTTAGAGCATGCACCACCACCCCCAGCAATAGCAGAGTATGCGACTGCCAATTTAATCAAGATGGGTTTTCCACAAAGAGCAGCTGAGGGCTCCATTGCTATTTGTACATGTCATGAAGAAGCTAAGGTGGGAGGGGGATACACTTGTCCACGATGCAAAGTACGTGTCTGTGAGCTTCCCACTGAATGCCGTATCTGTGGATTGACCCTTATTTCTTCACCTCATTTGGCAAGGTCATATCATCATCTCTTTCCAATAGTGCCATTTGATGAGGTGCCACCATCAGTTCGAAATGACCCAATTCACAGATTCCCTAGCACTTGTTTTGGTTGTCAACAGAGTCTTCTTAGTCCTGGAAACAAGTCTGGACTTTCTGTCACTTGCCCGAAATGCAAACAGTATTTCTGCATTGATTGTGACATCTACATTCATGAGAGCTTGCATAACTGCCCAGGTTGTGAGAGTTTCAGGCATTCGAAGGCAGAATGA 1479 0.4591 MATTTPDGLYPHNATSFWGVLPLLMVVLVCVGCVQGGINPSASPFWKSLSQHVHWYLGSSYCNATASVLVPPVNMNTYAERPTNGEVEEDDDEDEVNGNARAWERTYAEDRSWESLQEDESGLLRPIDNKAIYHSQYRRRLRALAATAAAARIQKGLIRYLYVVVDLSKAASETDFRPSRMAVIGKQVEAFIREFFDQNPLSHIGLVTIKDGIAHSLTELGGSPESHIKALMGKLECSGDASLQNALELVHGYLNQIPSYGHREVLVLYSALSTCDPGDVMETIQKCQKSKIRCSVIGLAAEMFICKHLCQETGGMYTVALDEAHFKELILEHAPPPPAIAEYATANLIKMGFPQRAAEGSIAICTCHEEAKVGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVPPSVRNDPIHRFPSTCFGCQQSLLSPGNKSGLSVTCPKCKQYFCIDCDIYIHESLHNCPGCESFRHSKAE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01230 492 Pfam TFIIH C1-like domain 437 485 IPR004595 GO:0006281|GO:0008270
Bach8g01230 492 Gene3D von Willebrand factor, type A domain 154 339 IPR036465 -
Bach8g01230 492 SUPERFAMILY Cysteine-rich domain 411 484 IPR046349 -
Bach8g01230 492 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 94 489 - -
Bach8g01230 492 Pfam Ssl1-like 164 354 IPR007198 -
Bach8g01230 492 FunFam General transcription factor IIH subunit 2 154 339 - -
Bach8g01230 492 FunFam General transcription factor IIH subunit 414 491 - -
Bach8g01230 492 ProSitePatterns Zinc finger C2H2 type domain signature. 458 478 IPR013087 -
Bach8g01230 492 SMART C1_4_2 437 485 IPR004595 GO:0006281|GO:0008270
Bach8g01230 492 NCBIfam transcription factor ssl1 376 485 IPR012170 GO:0000439|GO:0006289|GO:0006351
Bach8g01230 492 ProSiteProfiles VWFA domain profile. 160 299 IPR002035 -
Bach8g01230 492 CDD vWA_transcription_factor_IIH_type 156 338 IPR007198 -
Bach8g01230 492 SMART VWA_4 158 334 IPR002035 -
Bach8g01230 492 PIRSF TFIIH_SSL1 70 486 IPR012170 GO:0000439|GO:0006289|GO:0006351
Bach8g01230 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 414 491 IPR013083 -
Bach8g01230 492 SUPERFAMILY vWA-like 156 321 IPR036465 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01230 K03142 - gmx:100803090 744.577