Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01225 ATGTGGGCTCTTCGCCGAGCTTCGGTTCCTCTTAGGAGCCGAGGATTTTGTGTAGGAACTTCTCGTGGTGCTTGTGTCAACTTAAGGAAAATTACTTGTGGGGAAGACGAGGCTGGTTTCTTTGAGTTTTCTCAAAGAACATATGATAGATTTCTACTGTCAAAGACATTTTACCACACAGGACATGCTTCTCCGAAATTTACTTTGAATAAGCGTGAACTTTCTTCCCAAACTGATGCAAGTAGCACCAAGGAGGAGAATGAGACTGATGATGATGAATTAGAAGTATCTGATGACGGTGAGGATGTTGAGGAACCACAAAATGAACTAGTGTTGTCAGAGACTGAGATTGATTCAACTGAGAAAAAATCACCTAAAAGAAGGCCTCAATCAGAACTATTCATAGCAATCCTAAATTCTCCAGGTTTGTCTGTTCATAACATTTTGGACAAGTGGGTTGAAGAAGGGAATGAACTAACAAGGTCAGAGGTCTCATTAACCATGCTTAATCTTAGAAGGCGTCGCATGTATGGGAGGGCATTGCAGCTCCTGGAGTGGCTTGAGGCAAAAAAGCAAATTGACTTCGTTGAGAAAGATTATTCATCTCATGTTGATTTGCTTGCCAAAATGCGTGGTCTTTATAAGGCAGAGAATTACATAGATTCTGTTCCAAAATCCTTTAGAGGGGAGTTAATCTACCGCACTTTATTGGCTAACTGTGTTAGTCAGAACAATGCTAAGAAGGCGGAGGAAATTTTCAATAAAATGAAAGACTTAGAGCTCCCACTTACAACGTTTACTTGTAACCAGTTGCTTCTTCTGTACAAGAGGATTGACAAGAAGAAAATTGCTGATGTGTTATTATTAATGGAGAAAGAGAATGTCAAGCCTTCTCATTTTACTTATAAACTCTTGATAGATGCTAAAGGTCAGACCAATGATATTGCCGGAATGGATCAAATTGTTGAGACTATGAAGGCTGAGGGTGTCGAACCAGACTTACGAACACAGGGAGTCTTGGCTAAGCATTATGCTTCAGCTGGACTCAAAGAAAAAGCTGAAGCTGTGTTGTTGGAGATGGAAGGAGGAAGCTTAAAAGAGCATCGGTGGTTATGTCAATCTTTGCTTCCTATCTATGCAGAGCTGGGAAATGCTGATGAAGTTGGGAGAATTTGGAAGGTCTGTGAATCAAACCCTAGGATTGAGGGGTGTGTGGCTGCAATAGAAGCTTGGGGCAAGCTGAAGAAAATTGAAGAAGCAGAGGCAGCTTTTGAGCGGATGTTGAAGAAATTAAAGAAGCCTTCTTCCAAGCCCTATTCAGCACTCCTCAAGGTTTATGCAAATCATAAGATGCTAATAAAGGGTAAGGATCTTGTTAAGCGAATGGCTGATAGTGGGTGCAAAATAGGCCCATTGACCTGGGATGCACTTGTGAAACTCTATGTCCAATCAGGGGAAGTGGAGAAGGCAGACTCTATGTTGCAAAAGGCTACCCAGCAGAACCAGATGAAGCCATTGTTTAGTTCTTACATGGCTATTATGGATCAGTATGCAAAGAGGGGTGACATCCATAATTCAGAAAAGATTTTTCATAGAATGAGACTAATTGGTTATACTTCTCGATTTAGACAGTTCCAAGCTCTAATACAGGCTTACGGAAATGCCAAGCTTCCAGCATACGGGATTCGGGAGAGGATGAAAGCTGATAATGTATTCCCTAACAAAGCGTTGGCTGGCCAGTTGGCTCTAGTTGATGCATTTAGGAAGACACCGGTTTCCGATCTATTGGATTGA 1794 0.4158 MWALRRASVPLRSRGFCVGTSRGACVNLRKITCGEDEAGFFEFSQRTYDRFLLSKTFYHTGHASPKFTLNKRELSSQTDASSTKEENETDDDELEVSDDGEDVEEPQNELVLSETEIDSTEKKSPKRRPQSELFIAILNSPGLSVHNILDKWVEEGNELTRSEVSLTMLNLRRRRMYGRALQLLEWLEAKKQIDFVEKDYSSHVDLLAKMRGLYKAENYIDSVPKSFRGELIYRTLLANCVSQNNAKKAEEIFNKMKDLELPLTTFTCNQLLLLYKRIDKKKIADVLLLMEKENVKPSHFTYKLLIDAKGQTNDIAGMDQIVETMKAEGVEPDLRTQGVLAKHYASAGLKEKAEAVLLEMEGGSLKEHRWLCQSLLPIYAELGNADEVGRIWKVCESNPRIEGCVAAIEAWGKLKKIEEAEAAFERMLKKLKKPSSKPYSALLKVYANHKMLIKGKDLVKRMADSGCKIGPLTWDALVKLYVQSGEVEKADSMLQKATQQNQMKPLFSSYMAIMDQYAKRGDIHNSEKIFHRMRLIGYTSRFRQFQALIQAYGNAKLPAYGIRERMKADNVFPNKALAGQLALVDAFRKTPVSDLLD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01225 597 Pfam PPR repeat 439 467 IPR002885 -
Bach8g01225 597 Pfam PPR repeat 408 430 IPR002885 -
Bach8g01225 597 Pfam PPR repeat 473 496 IPR002885 -
Bach8g01225 597 Pfam PPR repeat 509 537 IPR002885 -
Bach8g01225 597 Pfam Pentacotripeptide-repeat region of PRORP 233 390 IPR033443 -
Bach8g01225 597 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 229 404 - -
Bach8g01225 597 MobiDBLite consensus disorder prediction 85 111 - -
Bach8g01225 597 MobiDBLite consensus disorder prediction 69 126 - -
Bach8g01225 597 SUPERFAMILY TPR-like 378 534 IPR011990 GO:0005515
Bach8g01225 597 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 405 591 - -
Bach8g01225 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 435 469 IPR002885 -
Bach8g01225 597 NCBIfam pentatricopeptide repeat 232 261 IPR002885 -
Bach8g01225 597 Gene3D Tetratricopeptide repeat domain 405 593 IPR011990 GO:0005515
Bach8g01225 597 Gene3D Tetratricopeptide repeat domain 228 404 IPR011990 GO:0005515
Bach8g01225 597 PANTHER OS12G0527900 PROTEIN 80 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01225 Bach-Chr8 8294467 8297710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01225 135 497 EF-hand Containing Proteins AT1G02150 24.661 1.29e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01225 - - cave:132191709 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01225 8 8294467 8297710 Bach8g01225 8 8294467 8297710 ECH