Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01198 ATGAAGCTCATCAATATTAACCCAAAAAACCTCAGACTCAGCCCGAAACGCATCTTTCGCTCCAAGAAAGAACGATCCACTGTTTCTAGATCTGACCCATCGTCTTTTAGCTCCGGAACCTCCTCGTCTTCCTCCGAGGGATCGAACCACAAGGCCGCCGCCAGAACCCCCACCAGCGTCTTGCACGGTGTTTCAGGCGATTGGTCTGATTATTCGACCGATACTCAGTACGAATTAGCCCAAGCATTCAAGCTCATAGACCGAGATAATGATGGGATCATCTCGCGAGAAGAGCTCGAGACTTTGTTGACTCGGCTCGGAGCTCAGCCGTTGAGTCAGGAGGAGGTCAAGATGATGCTCGGCGAGGTGGATCGTGATGGTCATGGGTGCATCAGTGTCGAGGCGCTGATGAACCAGGTCGGATCGGCTTGCGGCCCGGTTTGTGACTCGGATGACTTGAGAGAGGCGTTTGACGTTTTTGATACGGATCAGGACGGGAGAATCTCGGCGGAGGAGCTCCTGCGGGTCTTCAAGGCTATTGGGGACGAGCGGTGCACGTTAGAGGAGTGTCGGCGCATGATAGAAGGTGTTGATAGGAACGGGGATGGGATCGTGTGCTTCGAGGACTTCTCGCGTATGATGGAGCTGCAGAGATGA 657 0.5388 MKLININPKNLRLSPKRIFRSKKERSTVSRSDPSSFSSGTSSSSSEGSNHKAAARTPTSVLHGVSGDWSDYSTDTQYELAQAFKLIDRDNDGIISREELETLLTRLGAQPLSQEEVKMMLGEVDRDGHGCISVEALMNQVGSACGPVCDSDDLREAFDVFDTDQDGRISAEELLRVFKAIGDERCTLEECRRMIEGVDRNGDGIVCFEDFSRMMELQR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01198 218 Gene3D - 72 140 - -
Bach8g01198 218 ProSitePatterns EF-hand calcium-binding domain. 198 210 IPR018247 -
Bach8g01198 218 ProSiteProfiles EF-hand calcium-binding domain profile. 78 109 IPR002048 GO:0005509
Bach8g01198 218 SUPERFAMILY EF-hand 73 215 IPR011992 -
Bach8g01198 218 CDD EFh 78 134 IPR002048 GO:0005509
Bach8g01198 218 FunFam calmodulin-like protein 3 148 218 - -
Bach8g01198 218 ProSitePatterns EF-hand calcium-binding domain. 161 173 IPR018247 -
Bach8g01198 218 ProSiteProfiles EF-hand calcium-binding domain profile. 185 218 IPR002048 GO:0005509
Bach8g01198 218 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 152 215 - -
Bach8g01198 218 SMART efh_1 115 143 IPR002048 GO:0005509
Bach8g01198 218 SMART efh_1 189 217 IPR002048 GO:0005509
Bach8g01198 218 SMART efh_1 152 180 IPR002048 GO:0005509
Bach8g01198 218 SMART efh_1 78 106 IPR002048 GO:0005509
Bach8g01198 218 ProSitePatterns EF-hand calcium-binding domain. 87 99 IPR018247 -
Bach8g01198 218 Gene3D - 141 218 - -
Bach8g01198 218 FunFam Calmodulin, putative 73 142 - -
Bach8g01198 218 Pfam EF-hand domain pair 152 214 IPR002048 GO:0005509
Bach8g01198 218 Pfam EF-hand domain pair 77 134 IPR002048 GO:0005509
Bach8g01198 218 CDD EFh 152 214 IPR002048 GO:0005509
Bach8g01198 218 MobiDBLite consensus disorder prediction 15 58 - -
Bach8g01198 218 MobiDBLite consensus disorder prediction 30 55 - -
Bach8g01198 218 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01198 Bach-Chr8 8040916 8041572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01198 9 218 EF-hand Containing Proteins AT3G10190 51.628 1.33e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01198 K13448 - qsa:O6P43_006439 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01198 8 8040916 8041572 Bach8g01198 8 8040916 8041572 ECH