Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01028 ATGGGCACCATGGAGTCCTCCGTCTATGGTGTCTCCAAACCCTTCTTTCTCTTCTTCGCCACTCTTTTGTTTCTGCCGTTTCATTCGGCATTGCCTCAAAACCCCACCCACAAGTCCTCATCTTCTTCCTCCGCCTCGGGTCAGATTAATTCTAACTCCGTTCTTGTGGCTCTCCTTGATTCTCATTACACTGAGCTCGCTGAGCTTGTAGAGAAAGCGCTTCTGTTGCAAACTCTTGAGGACACCGTTGGGAAGCACAATATTACCATTTTTGCGCCCAGGAATGAAGCGTTGGAGCGCCAGCTCGACCCTGAGTTCAAGCGATTCTTGCTTGAACCCGGCAACTTGAAGTCATTGCAGACGCTTTTGATGTTTCACATTGTTCCTAAACGGATCGCGTCTCACCAGTGGCCCGCTGGGAATTCTGGGTTGGTTCGGCACCAGACCTTGTGCAACGACCATGTGCATTTGATGAAGAAGGATTCCGGGAAGGACGTTGTTGACTCGGCCGAGATTGTTCGCCCAGACGACGTGGTTCGTCCCGACGGTTTGATTCACGGGATTGAGCGCTTGTTGATTCCACGTTCGGTGCAGGAGGATTTTAATCGTAGGAGGAATTTGCGAGATATCTCGGCGGTTATACCAGAGGGAGCGCCGGAGGTGGACCCCAGAACCCACCGGTTGAAGAAGCCCGCTCCAGTTCCCGCCGGGGCTCCACCTGTATTACCAATTTATGATGCCATGGCACCAGGTCCCTCGCTGGCTCCTGCTCCGGCGCCGGGACCCGGTGGACCTCGCCATCACTTCAATGGGATGCGGCAGGTGAAAGACTTCATCCAGACCCTGTTACATTATGGTGGGTATAACGAAATGGCTGATATTCTGGTTAATTTAACTTCTCTAGCCACCGAAATGGGAAGGTTAGTCTCAGAGGGTTACGTCATCACCGTGTTGGCTCCGAACGACGAGGCCATGGCGAAGCTAACAACGGACCAATTAAGTGAACCGGGCGCACCGGAGCAGATAATCTACTACCATATAATACCCGAGTATCAGACCGAGGAGAGCATGTACAATGCAGTGAAGAGGTTCGGGAAGGTCCGCTACGACACTCTGCGGTTACCACATAAGGTGGTGGCTCAGGAGGCGGATGGTTCGGTGAAATTTGGTCAAGGTGAAGGCTCTGCGTATCTGTTTGACCCTGATATATACACAGATGGAAGAATTTCAGTGCAGGGTATTGATGGGGTTCTTTTCCCACCGGAGGAAGAACCAAAGACAGAACAGAAAACAGCTCCACTTGTTAAAGTTGCTGCTAAACCAAGGAGAGGGAAATTGCTGGAAGTTGCTTGTAGCATGCTTGGAGCTTTTGGGAGATTCTGCTAA 1386 0.5144 MGTMESSVYGVSKPFFLFFATLLFLPFHSALPQNPTHKSSSSSSASGQINSNSVLVALLDSHYTELAELVEKALLLQTLEDTVGKHNITIFAPRNEALERQLDPEFKRFLLEPGNLKSLQTLLMFHIVPKRIASHQWPAGNSGLVRHQTLCNDHVHLMKKDSGKDVVDSAEIVRPDDVVRPDGLIHGIERLLIPRSVQEDFNRRRNLRDISAVIPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPRHHFNGMRQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVITVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVKRFGKVRYDTLRLPHKVVAQEADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEPKTEQKTAPLVKVAAKPRRGKLLEVACSMLGAFGRFC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01028 461 FunFam fasciclin-like arabinogalactan protein 15 54 195 - -
Bach8g01028 461 ProSiteProfiles FAS1/BIgH3 domain profile. 50 192 IPR000782 -
Bach8g01028 461 ProSiteProfiles FAS1/BIgH3 domain profile. 275 403 IPR000782 -
Bach8g01028 461 SUPERFAMILY FAS1 domain 254 422 IPR036378 -
Bach8g01028 461 SMART fasc_3 89 195 IPR000782 -
Bach8g01028 461 SMART fasc_3 316 421 IPR000782 -
Bach8g01028 461 Pfam Fasciclin domain 62 194 IPR000782 -
Bach8g01028 461 Pfam Fasciclin domain 300 420 IPR000782 -
Bach8g01028 461 Gene3D FAS1 domain 294 421 IPR036378 -
Bach8g01028 461 Gene3D FAS1 domain 54 195 IPR036378 -
Bach8g01028 461 SUPERFAMILY FAS1 domain 53 195 IPR036378 -
Bach8g01028 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 10 461 IPR044654 -
Bach8g01028 461 FunFam Fasciclin-like arabinogalactan protein 16 270 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01028 Bach-Chr8 6862826 6865154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01028 - - qsa:O6P43_005749 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01028 8 6862826 6865154 Bach8g01028 8 6862826 6865154 ECH