Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00988 ATGGCTTCTTCGCACCTTCTCTGTCTGCTCTGTTTCTTCTCCGTTTTTGTCTTCACTTCATCCACCATTACCATACCTCTGACTCCTTTATTCACCAAACACTCATCCTCAGACCTATTTCAGACCCTCAAAGTCGTTGCCTCTGCTTCTCTAACCAGAGCCCACAACATCAAGCACCGAAATTCCAATTCTTCTTCTTCCCTTATCAGAACACCAGTTAGCCCCAAAAGCTATGGTGGGTACTCCATTGATCTTAAATTTGGAACCCCACCTCAAACATTACCTTTCGTTCTGGACACTGGAAGTAGCCTGGTCTGGTTCCCCTGTACCTCTCGCTATGTTTGTTCGAGATGTTCCTTCCCAAACATTGACCCAACAAAAATCCCCAAGTTTATTCCCAAGAATTCATCCTCAGCAAAGATCCTAGGTTGCAGAAACCCAAAATGTGGATGGATTTCCGGTCCCGATGTTAAATCTCGATGCCAAGACTGCAAACCCGATGCCCAGAATTGCACACAGAGCTGCCCTGCTTATGGAATTCAGTATGGTTTGGGATCAACACTTGGCATATTGCTCTCAGAAAATCTGGATTTTCCAGAGAAAGTTGTGCCCGATTTTATTGTCGGGTGCTCCTTATTGTCGATCCGCCAACCAGCTGGAATCGCCGGGTTTGGTCGCGGCCCACAATCCTTGCCCTCACAGATGGGTCTCAACAGATTCTCTTACTGTTTGCTGTCTCTTCGCTTCGGCGACACGCCGGAGAGCAGTGACCTTATTTTGCAGAGTGGGCCCTCCAGGGACGGCAAGACTCAAGGCCTCCGCTACACACCGTTTCACAAAAACCCGGCTGTGAAAAACTCTGCATTCCGCGAGTACTATTATGTAACTCTTCGCAAAGTCATCGTCGGCAAACAGAGAGTGAAGATTCCGTACAAGTTACTGGTCCCAGATTCCGATGGAAACGGAGGTTCCATAGTGGACTCTGGCTCCACATTTACATTCATGGAAAAGCCCATTTTTGATTTGGTGGCACAAGAATTTGAGAAACAGATGGCTAATTATACAAGAGCAAAAGACATTGAAGCTCAATCTGGTTTAAGGCCCTGTTTCGATATATCGGCAAATAAATCAGAATCTTTATCTTTCCCGGAATTAACTTTCCAGTTCAAAGCAGGTGCCAAAATGGCATTGCCTTTAACCAACTACTTCTCTTTGGTCGGTAAATCCGCTGCAGCGTGCTTGACCATTATCACCGATGATGTCGTCTCTCCGACGATGAATGGCGGGCCGGCGATAATCTTGGGTAATTTTCAGCAGCAGAACTTCTACGTGGAATATGACTTGGAAAATGAGAGGCTTGGATTTCGGCCTCAAAATTGCAAAAGGACTGTTTAA 1395 0.4624 MASSHLLCLLCFFSVFVFTSSTITIPLTPLFTKHSSSDLFQTLKVVASASLTRAHNIKHRNSNSSSSLIRTPVSPKSYGGYSIDLKFGTPPQTLPFVLDTGSSLVWFPCTSRYVCSRCSFPNIDPTKIPKFIPKNSSSAKILGCRNPKCGWISGPDVKSRCQDCKPDAQNCTQSCPAYGIQYGLGSTLGILLSENLDFPEKVVPDFIVGCSLLSIRQPAGIAGFGRGPQSLPSQMGLNRFSYCLLSLRFGDTPESSDLILQSGPSRDGKTQGLRYTPFHKNPAVKNSAFREYYYVTLRKVIVGKQRVKIPYKLLVPDSDGNGGSIVDSGSTFTFMEKPIFDLVAQEFEKQMANYTRAKDIEAQSGLRPCFDISANKSESLSFPELTFQFKAGAKMALPLTNYFSLVGKSAAACLTIITDDVVSPTMNGGPAIILGNFQQQNFYVEYDLENERLGFRPQNCKRTV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00988 464 Gene3D Acid Proteases 261 464 IPR021109 -
Bach8g00988 464 Gene3D Acid Proteases 55 251 IPR021109 -
Bach8g00988 464 Pfam Xylanase inhibitor C-terminal 293 456 IPR032799 -
Bach8g00988 464 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 96 107 IPR001969 GO:0004190|GO:0006508
Bach8g00988 464 FunFam Aspartyl protease family protein 264 463 - -
Bach8g00988 464 PANTHER OS07G0603500 PROTEIN-RELATED 36 460 - -
Bach8g00988 464 CDD pepsin_A_like_plant 80 460 IPR034161 -
Bach8g00988 464 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Bach8g00988 464 PRINTS Pepsin (A1) aspartic protease family signature 432 447 IPR001461 GO:0004190|GO:0006508
Bach8g00988 464 PRINTS Pepsin (A1) aspartic protease family signature 324 335 IPR001461 GO:0004190|GO:0006508
Bach8g00988 464 ProSiteProfiles Peptidase family A1 domain profile. 81 456 IPR033121 -
Bach8g00988 464 Pfam Xylanase inhibitor N-terminal 81 256 IPR032861 -
Bach8g00988 464 FunFam Aspartic proteinase nepenthesin-2 54 258 - -
Bach8g00988 464 SUPERFAMILY Acid proteases 76 460 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00988 Bach-Chr8 6576432 6577826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00988 64 462 Miscellaneous Gene Families AT1G44130 25.339 3.90e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00988 - - qsa:O6P43_006018 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00988 8 6576432 6577826 Bach8g00988 8 6576432 6577826 ECH