Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00977 ATGGAGAACAGTAAATCCTTCTCCATGGCTCCAATCACCCAAAGACCGGAAGGTAAAGTGACAATAAGCACCGGAGGCGCTAGCGGCATTGGTGCACCTACTGCTAAACTATTTGTTCAGCGTGGTGCTAAGGTCATTGTTGCTGATGTTCAAGATGGCCTTGGCCAGTCACTTTTCAAAGCTCTTGGATCAAACGACATCGTTTTCTACTCCGTTCAGTGGGATGTCACATGTGATTCAGACGTCAAAAACGTGGTTGAGATGGCAATGTCCAAGTTCGGGAAGCTTGATATCATGCTAGAAGGCAAAGTGGCAATAATCACTGGAGGCGCTAGCGGCATTGGTGCGGCTACTGCTAAACTATTTCTTCAACATGGTGCAAAGGTCGTTGTTGCTGATGTTCAAGACGACCTTGGCCAGTCACTTTGCAAATCTCTTGGATCAAACGACACCGTTTTCTATGTTCACTGTGATGTCACATGTGATTCAGACGTCAAAAACGTTGTTGACACGGCAGTGTCCAAGTTCGGGAAGCTTGATATCATGTACAACAACGCAGGCGTCGCCGGAGCAGTGGATCCCACTACACTGGGCTCTGATAACGAGAATTTCAAAAGGGTTTTTGAAGTTAACGTTTACGGAGCTTTCTTGGGTGCCAAGCATGCTGCTAGGGTTATGATCCCAAGAAATGAAGGGGTCATTCTTTTCACTGCTAGTGTTGCTTCTGTGATTGCTGGGGAGTCCTCACACGCATACACCATGTCAAAGCACGCAGTGGTGGGCCTTATGAAGAACCTGTGCGTGGAGTTGGGGCAGCATGGGATCAGAGTGAATTGCATCTCTCCGGCCGCCATTACCACTCCGTTGCTGAACAATGCGTTGAAAATAGACAGAAACGTGGTGGAGGGTGTTCTAAGGGCAACGTCAATATTAAAAGGTGAAATTGCAGAGGTGGAGGACATAGCAGAGGCAGCAGTTTATTTGAGCAGCGACGAGTCCAAGGTTGTGAACGGAGTGAACTTGATAGTGGATGGGGGTTATAGCACTACGAATCAGTCATTTACTTTTGCCCTGAAAAATGTGATGACTCAAACTGCAAATGGATATGGCCACCACCACTAA 1122 0.4733 MENSKSFSMAPITQRPEGKVTISTGGASGIGAPTAKLFVQRGAKVIVADVQDGLGQSLFKALGSNDIVFYSVQWDVTCDSDVKNVVEMAMSKFGKLDIMLEGKVAIITGGASGIGAATAKLFLQHGAKVVVADVQDDLGQSLCKSLGSNDTVFYVHCDVTCDSDVKNVVDTAVSKFGKLDIMYNNAGVAGAVDPTTLGSDNENFKRVFEVNVYGAFLGAKHAARVMIPRNEGVILFTASVASVIAGESSHAYTMSKHAVVGLMKNLCVELGQHGIRVNCISPAAITTPLLNNALKIDRNVVEGVLRATSILKGEIAEVEDIAEAAVYLSSDESKVVNGVNLIVDGGYSTTNQSFTFALKNVMTQTANGYGHHH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00977 373 Pfam short chain dehydrogenase 19 100 IPR002347 -
Bach8g00977 373 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 239 267 IPR020904 GO:0016491
Bach8g00977 373 FunFam Short-chain dehydrogenase reductase 99 352 - -
Bach8g00977 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 99 IPR036291 -
Bach8g00977 373 Pfam Enoyl-(Acyl carrier protein) reductase 109 348 - -
Bach8g00977 373 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 14 100 - -
Bach8g00977 373 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 252 271 IPR002347 -
Bach8g00977 373 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 232 240 IPR002347 -
Bach8g00977 373 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 188 IPR002347 -
Bach8g00977 373 PRINTS Glucose/ribitol dehydrogenase family signature 252 271 IPR002347 -
Bach8g00977 373 PRINTS Glucose/ribitol dehydrogenase family signature 177 188 IPR002347 -
Bach8g00977 373 PRINTS Glucose/ribitol dehydrogenase family signature 226 242 IPR002347 -
Bach8g00977 373 PRINTS Glucose/ribitol dehydrogenase family signature 104 121 IPR002347 -
Bach8g00977 373 PRINTS Glucose/ribitol dehydrogenase family signature 311 331 IPR002347 -
Bach8g00977 373 PRINTS Glucose/ribitol dehydrogenase family signature 273 290 IPR002347 -
Bach8g00977 373 Gene3D - 11 99 - -
Bach8g00977 373 Gene3D - 100 363 - -
Bach8g00977 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 349 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00977 Bach-Chr8 6491917 6495552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00977 100 289 Miscellaneous Gene Families AT2G29340 33.854 1.27e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00977 - - pop:7469966 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00977 8 6491917 6495552 Bach8g00977 8 6491917 6495552 ECH