Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00966 ATGGCAAGCCCTACGGAGAAAAGAGAAGGCGTCCACACCCACATTGCTCAGTGGCCAATTTGCACGCTGGGATGGTCGATTCGGCAAGACAAGAATCCTCGCCTCGCCATTGGTAGTTTCTTGGAAGACTACAGCAACAAGGTTGAACTTGTTCACTTCAACTACGACACATTCAATTTCACCACCGATCCTCGTCTGGTCTTCGATCACCCTTACGCTCCGACAAACCTCATGTTCTTCCCCTCCGAGGACACCGCCAACCCCGACATCCTGGCCACCTCCGGCGACTACCTAAGACTTTGGGAGATCCATGAAGAACGAATTGAACTCAGGTCCCTTCTAAATGGTAACAAACTCAGTGACTATAGCTCGCCGATAACCTCTTTTGATTGGGCTGAGTTTGATCCCCGCCGTATTGCTGCATCAAGTGTGGACACCACGTGTATCATTTGGGATATAGAGAAGGAAGCTGTGGACACACAGTTAGTGGCACACGACAAAGAAGTGTACGACATTTCATGGGGTGGTTTTAATATTTTTGCTTCTGTTTCCGGGGATGGTTCGGTTAGGGTGTTCGATTTGAGGGACAGGGAAAAATCGACCATAATTTATGAAAACCCGGCGCAGAATTGTCCTTTACTGCGGTTGGAATGGAACAAGGCTGATCCAAGGTTTTTGGCTACCGTAGGAATGGACAGTAATAAAGTGATCATAATGGATATAAGAATACCGACGACACCGTTGACGGAGTTAAATAAGCACAAGAGGAGTGTTAATGCTGTATCGTGGTCCCCACAGATAGGACGGCATCTATGCTCTGTTGGCGATGACTCAAGGGCTATGATTTGGGAGGTGGGTGGGACTGAATTTCAAGAGGGGAAAGGGAGTGACGTGGAGCCGGAGATGTGGTATGGATCAACGGCTGAGATTAATCAAGTGCGTTGGTGTCTTGTTCAGTCGGACTGGATTGCCCTTGCTTCATCAAATAGGTTACAGCTCTTGAAGCTGATTAGTGTTTCCGGGGAGGGGGGCATCAATAAGCTGAGAAAGAATACCCGGGAAAATATCGGGCGACTCGCTGCTCTGCACCTTTTGGTTGTGTTGCGGGAATATAAATCCCTTTTTTCCGTTGCTTGCAGAAGAAAGAGAGCTAACTCCCGTCTCAAATATGGCGATGACAGTGCATGTCTTGCTGGGCTGGCTTTTATGTTTTCGGCTAGCATTTTGCTACAGATTCTGGCATGTGCAATATACAACAATTGGTGGCCCATGTTATCAGCTATCATGTATGTGCTGGTACCTATGCCTTGCCTATTCTTTGGAGGTGGAACCACTCAGTTTTTGATAAGCCGTGATGGTGGGGGTTGGATAGACGCCGCTAAATTTTTGACAGGAGCATCAACTATGGGGAGTGTAGCAATTCCTCTAATCCTTCGGCATGCTGAAATGATTACGACAGGAGCCATGTTCATTGAGCTTGTATCTTTCTTCATATTTGTATGTACTGTTTTGTGTTTCCACCAAGCTAGCCTTGATGATGATTGGTAATAAATATAAACTCTCCTGGCTTACTGCATCCTGCTTGGTATCTTGATCATGTACAATACCCATATTGAGGAAAAACAACAGTGAAAATCATGACTTGAACTTTGTAAAGCTATGTAACTTATATTCTGCTATGCATA 1685 0.4599 MASPTEKREGVHTHIAQWPICTLGWSIRQDKNPRLAIGSFLEDYSNKVELVHFNYDTFNFTTDPRLVFDHPYAPTNLMFFPSEDTANPDILATSGDYLRLWEIHEERIELRSLLNGNKLSDYSSPITSFDWAEFDPRRIAASSVDTTCIIWDIEKEAVDTQLVAHDKEVYDISWGGFNIFASVSGDGSVRVFDLRDREKSTIIYENPAQNCPLLRLEWNKADPRFLATVGMDSNKVIIMDIRIPTTPLTELNKHKRSVNAVSWSPQIGRHLCSVGDDSRAMIWEVGGTEFQEGKGSDVEPEMWYGSTAEINQVRWCLVQSDWIALASSNRLQLLKLISVSGEGGINKLRKNTRENIGRLAALHLLVVLREYKSLFSVACRRKRANSRLKYGDDSACLAGLAFMFSASILLQILACAIYNNWWPMLSAIMYVLVPMPCLFFGGGTTQFLISRDGGGWIDAAKFLTGASTMGSVAIPLILRHAEMITTGAMFIELVSFFIFVCTVLCFHQASLDDDW 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00966 515 Pfam Vacuolar protein sorting 55 398 509 IPR007262 -
Bach8g00966 515 SMART WD40_4 61 102 IPR001680 GO:0005515
Bach8g00966 515 SMART WD40_4 112 152 IPR001680 GO:0005515
Bach8g00966 515 SMART WD40_4 244 284 IPR001680 GO:0005515
Bach8g00966 515 SMART WD40_4 155 193 IPR001680 GO:0005515
Bach8g00966 515 SMART WD40_4 199 240 IPR001680 GO:0005515
Bach8g00966 515 Pfam WD domain, G-beta repeat 162 193 IPR001680 GO:0005515
Bach8g00966 515 ProSitePatterns Trp-Asp (WD) repeats signature. 271 285 IPR019775 -
Bach8g00966 515 Gene3D - 9 341 IPR015943 GO:0005515
Bach8g00966 515 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 251 285 - -
Bach8g00966 515 ProSiteProfiles Trp-Asp (WD) repeats profile. 162 202 IPR001680 GO:0005515
Bach8g00966 515 PANTHER WD REPEAT CONTAINING PROTEIN 5 335 IPR045159 -
Bach8g00966 515 SUPERFAMILY WD40 repeat-like 19 336 IPR036322 GO:0005515
Bach8g00966 515 ProSiteProfiles Trp-Asp (WD) repeats profile. 251 285 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00966 Bach-Chr8 6419851 6425960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00966 393 510 EF-hand Containing Proteins AT1G32410 54.545 8.66e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00966 K11805 - jre:109002145 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00966 8 6419851 6425960 Bach8g00966 8 6419851 6425960 ECH