Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00900 GCGAGCCCAGCGAAGAGAAAGAGCGAGCGAGGGTGAGATTTTTGTTGGTTCCATTCTCGTTTTTTCTGTCGTTTGAGTTTCGGTTATGGCGGAGCATTTGGCATCCATATTCGGAACTGAGAAGGACAGGGTGAACTGCCCTTTCTACTTCAAGATCGGAGCTTGCAGGCATGGCGACCGCTGCTCCAGACTTCACACTAAGCCCACCATTAGCCCCACTCTACTTCTCTCCAACATGTACCAGAGACCTGATATGATCACCCCAGTCGTTGACCCTAATCAAGGACAAGCACTGGACCCCGACAAAGTACAAGATCACTTCGAGGATTTCTATGAAGATCTATTCGAGGAGCTCAGCAAGTATGGAGAAATTCAGAGCTTGAATATTTGTGATAATTTAGCAGATCACATGGTCGGTAATGTATATGTTCAGTTTAAAGAAGAAGACCATGCTGCAAATGCCCTAATGAATCTGACTGGAAGATTTTACTCAGGGCGACCCATCATTGTTGACTTTTCTCCTGTGACGGATTTTCGTGAGGCCACTTGTAGGCAGTACGAGGAAAATGTTTGTAACCGTGGTGGCTACTGCAATTTCATGCACCTGAAAAAGATTAGCAGGGAGTTGAGAAAGCGACTATTTGGGAGAAGCAGACGGGGGCATGGCCCCAGTAGAAGCAGAAGTCGGAGCCCTCCTAGGCATCGTAACGATGAGCGTTTACATTCTGGTCGAAATTCTAATAGAAGAGATCATGACAGATATCACGGCCACCATGGTCGGAACAGAATGCCTAGAAGTCGTAGTCCTCGACGTAGAGGCCCGGCGGGAAGGGACAGGAGCCCAGTTAGAGAAAGTAGTGTAGAAAGGAGAGCTAGGATAGAACAATGGAACAGGGAGAAGGAACAGGAAGATTCTGGTAACAAGAACGATAGGAATGATAATGATTATGAACAACGGAGTGTTTCACAGAATGGAGATGACTATGATAACCACCAGGTATAGTAGCTTAGTAGCGTGATCACTTAAGCAAGAACGCAAGAGGAGAGACTGTAGTAACAGTGTGGCTAGTAATCCGTTTTGTATTGGTTTGCACATCCGTTAAGACGGTTTTTGTTCCTCGTTTCATATGATTGTCCTATTCTGAATTGTCGATTGTTCAGTTGTAGTACTTCCTAATATCTATATTTTATACCAGTGCGTTTAA 1205 0.4523 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMITPVVDPNQGQALDPDKVQDHFEDFYEDLFEELSKYGEIQSLNICDNLADHMVGNVYVQFKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRKRLFGRSRRGHGPSRSRSRSPPRHRNDERLHSGRNSNRRDHDRYHGHHGRNRMPRSRSPRRRGPAGRDRSPVRESSVERRARIEQWNREKEQEDSGNKNDRNDNDYEQRSVSQNGDDYDNHQV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00900 305 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 151 174 IPR000571 GO:0046872
Bach8g00900 305 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 14 37 IPR000571 GO:0046872
Bach8g00900 305 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 84 140 IPR000504 GO:0003723
Bach8g00900 305 PRINTS U2 auxiliary factor small subunit signature 104 126 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 PRINTS U2 auxiliary factor small subunit signature 76 91 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 PRINTS U2 auxiliary factor small subunit signature 37 57 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 PRINTS U2 auxiliary factor small subunit signature 18 37 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 PRINTS U2 auxiliary factor small subunit signature 131 155 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 PRINTS U2 auxiliary factor small subunit signature 166 178 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 PANTHER U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT 1 281 IPR009145 GO:0000398|GO:0003723|GO:0089701
Bach8g00900 305 SMART rrm1_1 45 143 IPR000504 GO:0003723
Bach8g00900 305 ProSiteProfiles Zinc finger C3H1-type profile. 149 176 IPR000571 GO:0046872
Bach8g00900 305 SUPERFAMILY RNA-binding domain, RBD 78 150 IPR035979 GO:0003676
Bach8g00900 305 ProSiteProfiles Zinc finger C3H1-type profile. 12 40 IPR000571 GO:0046872
Bach8g00900 305 CDD RRM_U2AF35B 44 146 - -
Bach8g00900 305 MobiDBLite consensus disorder prediction 202 224 - -
Bach8g00900 305 MobiDBLite consensus disorder prediction 185 201 - -
Bach8g00900 305 MobiDBLite consensus disorder prediction 243 305 - -
Bach8g00900 305 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 147 IPR000504 GO:0003723
Bach8g00900 305 SMART rrm2_1 68 143 IPR003954 GO:0003676
Bach8g00900 305 MobiDBLite consensus disorder prediction 185 305 - -
Bach8g00900 305 SMART c3hfinal6 149 175 IPR000571 GO:0046872
Bach8g00900 305 SMART c3hfinal6 13 39 IPR000571 GO:0046872
Bach8g00900 305 FunFam Splicing factor U2AF small subunit 45 146 - -
Bach8g00900 305 MobiDBLite consensus disorder prediction 225 242 - -
Bach8g00900 305 Gene3D - 43 146 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00900 Bach-Chr8 5940440 5943654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00900 K12836 - qsa:O6P43_005880 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00900 8 5940440 5943654 Bach8g00900 8 5940440 5943654 ECH