Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00826 GCGTTGTAAGTTGCAGTAGCAGACTAGCAGAACGAAGCTCACTGCGAGCTAGCCAGAGTGCAAGTTCGCACTCAACTCACGGACTAAAACAATGCCTGCAACTCCAATTCCATCTTCTTTCTTTATCCTCCGACCACGCTTCATTTCCAACTTTAAACCTATATTCCAATCTTTTGACTACCAATTTTCATCTTCTCCTGTCGTATTCAATCGCACTCGTAATTTCTCCATCCCCGGAATTCCATTTACTTCAAGTGCTAGAGTTCACTCTACCTTATCACAAGCGAAAGGAACCGAGTCTCCCAGCGACAATGGGAGCGGCGGTGGTAGGTCAGGTGGGTTATCTCCTGGTCCAGTCACCGGAGATGTGGAGAAAATCGACGTAAACCCTCCCAAGGGGACACGGGATTTCCCGCCCGAAGAAATGCGAATGCGAAACTGGCTTTTCAACAATTTCAAAGAGGTTTCAGGATTGTATGGGTTCGAGGAGGTTGATTTTCCGGTGCTTGAGTCAGAGGCATTATTCGTTAGGAAAGCAGGGGAGGAGATTAAAGACCAGCTTTATTGTTTTGAAGATAGGGGTAATCGACGTGTTGCATTGAGGCCTGAACTTACTCCTTCTTTGGCAAGGCTGGTGATACAGAAAGGAAAATCTGTGTCCCTCCCATTGAAGTGGTTTACTGTTGGACAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGTCGGCGTGAGCACTACCAGTGGAACATGGATATTATTGGTGTTCCTGGGGTAATGGCTGAAGCAGAGCTCATTTCTTCTGTTGTCACCTTGCTCAAGCGGGTTGGAATCACAAAATCAGATGTTGGATTTAAGGTTTCAAGCCGAAAGGTTCTGCAAGAAGTATTAAGATGTTATTCCATACCTGATAATTTATTTGGCAAGGTCTGCGTCATAATTGACAAAATTGAGAAAATTCCGTTGGATGAGGTAAAGAAAGAGTTGGAGGCTGTTGGTATTTCGCAAGAGGTTGTCCAGGAGCTATTGCAAGTCCTTTCAATAAGGTCATTGCCAGAGTTGGAAGAGAGACTTGGAAGTTCTGGGGAAGCAGTTGCTGATTTGAAAGAGCTATTCTCACTTGCTGGGAAATTTGGGTATGCTGAGTGGCTTCAATTTGATGCATCGGTTGTTCGTGGACTTGCTTACTACACTGGCATTGTATTTGAGGGTTTTGACAGAGATGGGAAGCTCCGAGCTATTTGCGGTGGTGGCAGATATGATCACTTGTTCTCAACTTTTGGTGGTGATGACATTCCTGCTTGTGGTTTTGGATTTGGTGATGCTGTCATTGTGGAATTGCTCAAAGAAAAGGGCCTGTTACCGGAGCTCAGCTTGCAAATTGAAAATATTGTGTGTGCTCTGGATCTTGATCTACAAGGAGCTGCCTCAATGGTTGCTACCGTTCTCAGAGAAAAAGGGCAGACAGTTGATTTGGTCTTGGAAAGCAAACCACTGAAATGGGTTTTCAAAAGAGCAGCTCGAATAAATGCTCAGCGCTTGGTACTAGTGGGGAATTCTGAATGGCAGAGGGGTATGGTTGGTGTCAAAATTCTATCTACTGGTCAACAGTATGAGGTCAAATTGGATGATCTATAGTAATTGGAATTGGAAGTTTCCATTTTGGGAATGAATGTTGAATTTTCTTTATTGGTATTTTGGTTTTTTCCTTTATTTTGATTATTTTTCTTCTTTCATTTTTTTCCCCCTTTTTTCGGTGTTATTCTACTAACATTTATATATTATTATACAGACCAGTATACATCTATGTATCTACTTCTGTTCATAGTTGTTTAT 1834 0.4297 MPATPIPSSFFILRPRFISNFKPIFQSFDYQFSSSPVVFNRTRNFSIPGIPFTSSARVHSTLSQAKGTESPSDNGSGGGRSGGLSPGPVTGDVEKIDVNPPKGTRDFPPEEMRMRNWLFNNFKEVSGLYGFEEVDFPVLESEALFVRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELISSVVTLLKRVGITKSDVGFKVSSRKVLQEVLRCYSIPDNLFGKVCVIIDKIEKIPLDEVKKELEAVGISQEVVQELLQVLSIRSLPELEERLGSSGEAVADLKELFSLAGKFGYAEWLQFDASVVRGLAYYTGIVFEGFDRDGKLRAICGGGRYDHLFSTFGGDDIPACGFGFGDAVIVELLKEKGLLPELSLQIENIVCALDLDLQGAASMVATVLREKGQTVDLVLESKPLKWVFKRAARINAQRLVLVGNSEWQRGMVGVKILSTGQQYEVKLDDL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00826 514 Pfam Histidyl-tRNA synthetase 103 407 IPR041715 -
Bach8g00826 514 SUPERFAMILY Class II aaRS ABD-related 432 514 - -
Bach8g00826 514 Hamap Histidine--tRNA ligase [hisS]. 96 513 IPR015807 GO:0004821|GO:0005524|GO:0006427
Bach8g00826 514 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 122 424 IPR006195 -
Bach8g00826 514 PANTHER HISTIDYL-TRNA SYNTHETASE 95 514 IPR004516 GO:0005737
Bach8g00826 514 Gene3D - 423 514 IPR036621 -
Bach8g00826 514 MobiDBLite consensus disorder prediction 58 79 - -
Bach8g00826 514 MobiDBLite consensus disorder prediction 58 109 - -
Bach8g00826 514 FunFam Histidine--tRNA ligase chloroplastic/mitochondrial 423 514 - -
Bach8g00826 514 PIRSF His-tRNA_synth 94 514 IPR004516 GO:0005737
Bach8g00826 514 Pfam Anticodon binding domain 440 514 IPR004154 -
Bach8g00826 514 NCBIfam histidine--tRNA ligase 100 510 IPR015807 GO:0004821|GO:0005524|GO:0006427
Bach8g00826 514 CDD HisRS-like_core 111 418 IPR041715 -
Bach8g00826 514 FunFam Histidine--tRNA ligase chloroplastic/mitochondrial 94 421 - -
Bach8g00826 514 Gene3D Bira Bifunctional Protein; Domain 2 94 421 IPR045864 -
Bach8g00826 514 SUPERFAMILY Class II aaRS and biotin synthetases 100 419 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00826 Bach-Chr8 5417287 5424146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00826 K01892 - gmx:100793186 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00826 8 5417287 5424146 Bach8g00826 8 5417287 5424146 ECH