Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00754 ATGAGAGATTTTGTGATCCTTGGCTCCTCCATCGTCACACCTCCTAATCCCTCTTCTCTTTCACAGTACCACCACCATAACCATAGTAAGCACTTCAAATCCTCAATTCCGAAGCTTACTTGTTCCAAACAACCTTCTTCACCGTTGAGCATTTCTGACAACCACCAAATCCCCCTCAAGCACTACGCTGGCCTTGCTTCCAAGCTCGCTGAAGATGGGAAACTTCAAGATTTTGGAATGCTTGTGGAGGCTGTCATTGATTCCGGGATGGATGCATCTCAATTTGTTCCAGCTTTGAGCGTTGAGCTCCTCACGAAGGGGATTCTAGTGGCTATTCGAGGTGGCAACATTCGGACTGTGATTCAGACTTTAAATGTTGTTCAAAAGCTTGGCATTTCTCTATCTTCTCTATCTGCTGGGCCTGCTAAGGAGTTGCTTGCAAGCGAATGTCGCCGGATTGTCCAGTGCGGCCAAATTGAGGAAGCTGTTGAATTTATGGAGGTTCTCTCACGTTTCCAGATATCAATCAGAGAACTGGTTCAGCCATCTGACCTAATAAAACGATGTATTCTTAGTCGTAAACCAAATTTGGCTGTGAGGTATGCCTGTCTTCTTTCACATGCACAGATATTGTTCTGCAATATTATATGTGAATTTGGAAAAAGGAAGGATTTAGTATCTGCTCTGAGAGCATATGAAGCATCCAAGAAGAACTTGAATAGTCCAAATATGCACCTATACCGGGCAATAATTGATGCTTGCGGGCTCTGTGGTGATTATCTGAAATCTAGGTACATATATGAGGAATTATTAAACCAGAAGATCACCCCAAACATATACGTCTTCAACAGTCTCATGAATGTGAATGCAAAAGATCTTAGCTACACGCTAGATCTATATAAGAATATGCAAAATCTAGGTTTGAAACCAGATATGGCATCTTATAACATCTTGCTGAAGGCTTGCTGTGTTGCTGGAAGAGTTGATTTCGCCCAAGAAATTTATAAGGAAGTTAAGCAATTGGAATCAATGGGAGTACTGAAGTTAGATGTCTTCACCTACAGCACAATTATAAAGGTCTTTGCAGATGCAAAATTGTGGCAAATGGCTTTAAAAGTCAAACAGGATATGCTGTCCGCTGGGGTCTCTCCTAATACTGTTGCTTGGTCGTCATTAATCAATGCCTGTGCACATGCAGGGCTTGTGGAGCAGGCAATTCAATTATTTGAAGAAATGCTTTTGGCTGGTTGTGAACCTAATACACAGTGTTTCAATATCATTTTACATGCATGCGTTGAAGCTTGCCAATATGATAGGGCTTTTCGCCTTTTCAAGTCTTGGAAGGGAAATAAGATGTTAGAATCATATGATGGGAGCAGCAATGACAATTCAGAGCAGGGAGATGGGCATTCTGCCAGTAGTACGCCAAAGCCAAATGGCATTTCCAATTCACATATTTTGACTTTTGCCAAGAGGTTTCCCTTCACACCAACTACTACAACATATAATATTTTATTGAAGGCCTGTGGTACTGATTACCACCATGCGAGAGCATTAATCAACGAGATGAAAATAGTAGGTCTTTCCCCTAATCACATAACCTGGTCAATTTTGATAAATGTATGCGGAGGGTCAGGCAATGTAGAGGGTGCCATTGAGATTTTGAAAGTCATGCACGATGCTAGAATTAAACCTGACGTTGTTGCATATACAACAGCCATCAAGGTTTGCGTAGAAAGTAAGAATTTTAAGGAGGCACTATTCTTATACGAGGAAATGAAATTATATGACATACGTCCAAATTTGGTGACGTATAATACATTACTGAGAGCTCGCAGTAAATATGGTTCCCTACATGAAGTGCAACAATGCCTGGCCATATACCAGGATATGCGAAAAGCAGGGTACAAATCCTGTGACCACTATCTTCAGAAACTGATTGAGGAGTGGTGTGAAGGAGTAATACTGAATAATAGACAGAATCAAGAGGACTCCTCTTCCAGCAATAAATCTGGATTAGAGAGACCTCAGAGTTTACTTCTTGAAAAAATTGCAGCGCACCTTTTGAAGAGGGTAGCAGACATCCTAGCAATTGATGTTCAAGGGCTCACAAAGGTTGAAGCTCGCATGGTTGTTCTCGCTGTTCTGCGAATGGTCAAAGAGAACTCTGGATTAGGACATTCAGTGAATAATGACATCTTGATTATCATAGGATCTGGTAAAGCAGATGAAACTCCAGCCAAACTCATAATGGAAGTGGAAGATGCAATAACAAGACTTCTCCAAGACGAAATAGGGCTAGAGGTTTTTCCAACCAAAGCCACATTGACACTAAATGACAAAGTAAGGTTAGAAAATACTGTAATTTCAAATGCCAAATTGGAAGATACACCAGAAAAGAATGAATCACGCACAGTAATGGGATATCAGACCAGGAGACCGGCAGTTGTACGAAGGTTGAAGGTCAGCAAAAAATCGTTACACCATTGGTTGCAGAGGAAAATAAGTATCAACAAGACTTGA 2523 0.4106 MRDFVILGSSIVTPPNPSSLSQYHHHNHSKHFKSSIPKLTCSKQPSSPLSISDNHQIPLKHYAGLASKLAEDGKLQDFGMLVEAVIDSGMDASQFVPALSVELLTKGILVAIRGGNIRTVIQTLNVVQKLGISLSSLSAGPAKELLASECRRIVQCGQIEEAVEFMEVLSRFQISIRELVQPSDLIKRCILSRKPNLAVRYACLLSHAQILFCNIICEFGKRKDLVSALRAYEASKKNLNSPNMHLYRAIIDACGLCGDYLKSRYIYEELLNQKITPNIYVFNSLMNVNAKDLSYTLDLYKNMQNLGLKPDMASYNILLKACCVAGRVDFAQEIYKEVKQLESMGVLKLDVFTYSTIIKVFADAKLWQMALKVKQDMLSAGVSPNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRLFKSWKGNKMLESYDGSSNDNSEQGDGHSASSTPKPNGISNSHILTFAKRFPFTPTTTTYNILLKACGTDYHHARALINEMKIVGLSPNHITWSILINVCGGSGNVEGAIEILKVMHDARIKPDVVAYTTAIKVCVESKNFKEALFLYEEMKLYDIRPNLVTYNTLLRARSKYGSLHEVQQCLAIYQDMRKAGYKSCDHYLQKLIEEWCEGVILNNRQNQEDSSSSNKSGLERPQSLLLEKIAAHLLKRVADILAIDVQGLTKVEARMVVLAVLRMVKENSGLGHSVNNDILIIIGSGKADETPAKLIMEVEDAITRLLQDEIGLEVFPTKATLTLNDKVRLENTVISNAKLEDTPEKNESRTVMGYQTRRPAVVRRLKVSKKSLHHWLQRKISINKT 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 341 IPR002885 -
Bach8g00754 840 Pfam Pentacotripeptide-repeat region of PRORP 220 338 IPR033443 -
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 385 419 IPR002885 -
Bach8g00754 840 Pfam PPR repeat family 384 431 IPR002885 -
Bach8g00754 840 Pfam PPR repeat family 565 611 IPR002885 -
Bach8g00754 840 Pfam PPR repeat family 497 542 IPR002885 -
Bach8g00754 840 MobiDBLite consensus disorder prediction 457 479 - -
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 350 384 IPR002885 -
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 243 277 IPR002885 -
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 566 600 IPR002885 -
Bach8g00754 840 Gene3D Tetratricopeptide repeat domain 485 686 IPR011990 GO:0005515
Bach8g00754 840 Gene3D Tetratricopeptide repeat domain 343 477 IPR011990 GO:0005515
Bach8g00754 840 Gene3D Tetratricopeptide repeat domain 211 342 IPR011990 GO:0005515
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 601 638 IPR002885 -
Bach8g00754 840 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 349 652 - -
Bach8g00754 840 NCBIfam pentatricopeptide repeat 387 421 IPR002885 -
Bach8g00754 840 NCBIfam pentatricopeptide repeat 533 567 IPR002885 -
Bach8g00754 840 NCBIfam pentatricopeptide repeat 568 601 IPR002885 -
Bach8g00754 840 NCBIfam pentatricopeptide repeat 352 386 IPR002885 -
Bach8g00754 840 NCBIfam pentatricopeptide repeat 246 279 IPR002885 -
Bach8g00754 840 NCBIfam pentatricopeptide repeat 423 450 IPR002885 -
Bach8g00754 840 Pfam PPR repeat 352 382 IPR002885 -
Bach8g00754 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00754 Bach-Chr8 4974030 4980454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00754 262 660 Glycosyltransferase AT1G05670 22.030 1.58e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00754 - - pcin:129311185 1221.45