Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00736 CAAAAATGCCTCGCCATGATGATAGATATGGGAATACCCGTCTCTATGTGGGACGGCTGTCTTCAAGGACACGTTCACGTGATCTGGAGCGAGTCTTCAGCAGATATGGAAGAATTCGAGATGTGGATATGAAGCATGATTACGCCTTTGTTGAATTTAGTGATCCTCGAGATGCTGACGATGCAAGATATAGTTTAGATGGGCGTGACGTAGACGGAAGTCGGATAATTGTGGAATTTGCTAAAGGGGGTCCGCGTGGTTCTCGTGACTATCTGGGTAGAGGTCCTCCTCCTGGATCTGGCCGCTGCTTTAATTGTGGCATTGATGGTCACTGGGCCCGAGATTGCAAAGCTGGAGACTGGAAGAACAAGTGTTACCGCTGTGGGGAAAGGGGTCATATAGAAAGAAACTGCAAGAATAGTCCCAAGAAGTTGAGTAGACATGCACGGAGTTATTCACGTTCACCTGTTAGGTCGCGTTCTCCTCGTCGTGGCAGAAGCCGCGATCGAAGTTACAGCCGTGACCGCAGTTACAGCCGGTCAAGATCCCCAGTTAGAAGAGAACGAAGCCCTGTTCGTGAAGATAAATCACGTAGTCCAGGTTCTGCAAGTCCCGAGGCCAGAAATAACTCTCCACCCTCCAATAAGAGGATGCGTAGTCCCACACCTAATGGCAGCAGCCCACTGAATAGGGGCGATGCGTCTCCTGGAAATGGTAGGGTGAGTCCGCGAGATGGATCTGACTACAGTGATGGTCCTAGGGCGAAGAGCAGAAGCCCTGTTAGCCCCACGAGGGAGAGTCGTGAAGACAGAAGTTATGCTAGTCCTAGAACAAATGGTCGCAGCCTCAGTCCTAGCCCTAGGGATGATAGGAGCCCTATTGATGATGACGATGACACTCGCCGTTCCCCAAGAGGCAGTGAATCACCTTAAATGCGTAGTCCCACACCTAATGGCAGCAGCCCACTGAATAGGGGCGATGCGTCTCCTGGAAATGGTAGGGTGAGTCCGCGAGATGGATCTGACTACAGTGATGGTCCTAGGGCGAAGAGCAGAAGCCCTGTTAGCCCCACGAGGGAGAGTCGTGAAGACAGAAGTTATGCTAGTCCTAGAACAAATGGTCGCAGCCTCAGTCCTAGCCCTAGGGATGATAGGAGCCCTATTGATGATGACGATGACACTCGCCGTTCCCCAAGAGGCAGTGAATCACCTTAATAGTACTCTTCTAGAGATGAGTTTGTTGTAGAGACAACGCCTAGAATGTGTGCTTTATTTATGACATGCACTTGAACCATCTGAAGTGTTCGTTGATATTGTTATTTAGACGATTTTATTTGTATGCGAGTTTTCATATTCTGGTTA 1361 0.496 MLTQAHYRPICSSPGLLCYFSRPSLSVRSIKLQNKSLNPYCVWKALGERSVSASISSVAKMPRHDDRYGNTRLYVGRLSSRTRSRDLERVFSRYGRFPGFCLNLELLSNDGLTVSGNHFRRIRDVDMKHDYAFVEFSDPRDADDARYSLDGRDVDGSRIIVEFAKGGPRGSRDYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLSRHARSYSRSPVRSRSPRRGRSRDRSYSRDRSYSRSRSPVRRERSPVREDKSRSPGSASPEARNNSPPSNKRMRSPTPNGSSPLNRGDASPGNGRVSPRDGSDYSDGPRAKSRSPVSPTRESREDRSYASPRTNGRSLSPSPRDDRSPIDDDDDTRRSPRGSESP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00736 393 ProSiteProfiles Zinc finger CCHC-type profile. 207 223 IPR001878 GO:0003676|GO:0008270
Bach8g00736 393 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 122 159 IPR000504 GO:0003723
Bach8g00736 393 SUPERFAMILY Retrovirus zinc finger-like domains 177 224 IPR036875 GO:0003676|GO:0008270
Bach8g00736 393 Gene3D - 59 173 IPR012677 -
Bach8g00736 393 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 166 IPR000504 GO:0003723
Bach8g00736 393 Gene3D - 176 205 - -
Bach8g00736 393 Gene3D - 206 250 - -
Bach8g00736 393 MobiDBLite consensus disorder prediction 344 358 - -
Bach8g00736 393 MobiDBLite consensus disorder prediction 285 316 - -
Bach8g00736 393 SUPERFAMILY RNA-binding domain, RBD 65 180 IPR035979 GO:0003676
Bach8g00736 393 MobiDBLite consensus disorder prediction 226 248 - -
Bach8g00736 393 FunFam serine/arginine-rich splicing factor RS2Z32-like isoform X1 176 204 - -
Bach8g00736 393 Pfam Zinc knuckle 206 223 IPR001878 GO:0003676|GO:0008270
Bach8g00736 393 Pfam Zinc knuckle 185 200 IPR001878 GO:0003676|GO:0008270
Bach8g00736 393 ProSiteProfiles Zinc finger CCHC-type profile. 185 200 IPR001878 GO:0003676|GO:0008270
Bach8g00736 393 SMART rrm1_1 72 162 IPR000504 GO:0003723
Bach8g00736 393 FunFam Serine/arginine-rich splicing factor RS2Z32 205 252 - -
Bach8g00736 393 MobiDBLite consensus disorder prediction 371 393 - -
Bach8g00736 393 SMART c2hcfinal6 185 201 IPR001878 GO:0003676|GO:0008270
Bach8g00736 393 SMART c2hcfinal6 207 223 IPR001878 GO:0003676|GO:0008270
Bach8g00736 393 MobiDBLite consensus disorder prediction 219 393 - -
Bach8g00736 393 MobiDBLite consensus disorder prediction 249 284 - -
Bach8g00736 393 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 71 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00736 Bach-Chr8 4882226 4886504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00736 K12896 - qsa:O6P43_006741 369.007