Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00715 ACCAAATAAGATTCTGTGTTAGTGCAGATCGGTCGTCAACGCCATTACGTGTGACTATAAGACTCGCGCTATTGTTTGGCAGCCGAAAGTGGGAAGAACGGGAGCTGAATACTGTAGCTCTAACAGTCATGGCCATAGCCGCCACCATTTCTCTTCCTCTCACATCGCCGGCTCGTCGCTATCTTACCTTCGTTAATCTATTTCGTTCTTCTTCAGCCTCTTCTTCTAACATTCACTTCAAAACTGCTCCGCATGCTGTAAAATACCCTAATTCTCGCCTCATCACTTCTTCAATGAGCATTGAGGCCCCCGTGAAGACCTCGTCAACTTCATTCCTTGACCGAAGAGAAAGTGGGTTTCTCCATTTCGCCAAGTATCATGGTCTCGGCAATGACTTCATTTTGATTGATAATAGAGACTCTTCAGAGCCCAAGATCAGTCCGGAGAAAGCTGTGCAACTATGTCACCGGAACTTTGGTATTGGTGCTGATGGAGTTATCTTTGTCATGCCGGGCATCAGTGGTACTGACTACATTATGAGGATCTTTAATTCTGATGGTAGTGAACCAGAGATGTGTGGTAACGGGATACGATGCGTTGCCAAATTCATTGCTCAGCTTGAGAATTTACATGGGAGGCATAGTTTCACTGTGCACACTGGTGCTGGCCTGATTGTTCCAGAAATTGTTGAGGATGGAAACGTTAGAGTTGATATGGGGGAACCGATTCTTAAAGCATCAGAAGTGCCTACTAGATTATCACCTTCAAATAAGGAGCATGCTGTTGTTAAGTCAGAGCTAGATGTAGATGGAGTTATCTGGGATGTGACATGCGTTAGTATGGGAAATCCACACTGTGTAACTTTTGGTACAAAAGGAAGCCAGAATTTGTTAGTTGATGAATTGAAACTAGCAGAAATTGGTCCACGATTTGAACATCATGCAATGTTCCCTGCTCGAACTAACACAGAGTTTGTGGAAGTTCTTTCCAATTCTCATCTGAAGATGCGTGTTTGGGAGCGCGGGGCAGGAGCAACTCTAGCTTGTGGAACTGGAGCTTGTGCTGTAGTTGTAGCAGCAGTCCTTGAGGGTCGCGCTGGAAGGAATTGCACGGTTGATCTACCCGGAGGGCCTTTGCAGATCGAGTGGAGGGAGGAAGACAATCATGTCTATATGACTGGCCCAGCTGAAGTAGTCTACTACGGATCCCTTCCCCTTTGATTCTTTGCTACTAAATTATTGTATGGATTTTCCAGCTCTGTAATATGAAATCCTCAACATTTGCATGATGGAGCCCGACTCTTATCGTGTATTGAATATCTTGC 1324 0.4509 MAIAATISLPLTSPARRYLTFVNLFRSSSASSSNIHFKTAPHAVKYPNSRLITSSMSIEAPVKTSSTSFLDRRESGFLHFAKYHGLGNDFILIDNRDSSEPKISPEKAVQLCHRNFGIGADGVIFVMPGISGTDYIMRIFNSDGSEPEMCGNGIRCVAKFIAQLENLHGRHSFTVHTGAGLIVPEIVEDGNVRVDMGEPILKASEVPTRLSPSNKEHAVVKSELDVDGVIWDVTCVSMGNPHCVTFGTKGSQNLLVDELKLAEIGPRFEHHAMFPARTNTEFVEVLSNSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWREEDNHVYMTGPAEVVYYGSLPL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00715 363 FunFam Diaminopimelate epimerase, chloroplastic 52 201 - -
Bach8g00715 363 Hamap Diaminopimelate epimerase [dapF]. 78 363 IPR001653 GO:0008837|GO:0009089
Bach8g00715 363 ProSitePatterns Diaminopimelate epimerase signature. 141 155 IPR018510 GO:0005737|GO:0008837|GO:0009089
Bach8g00715 363 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 52 208 - -
Bach8g00715 363 Pfam Diaminopimelate epimerase 80 200 IPR001653 GO:0008837|GO:0009089
Bach8g00715 363 Pfam Diaminopimelate epimerase 235 355 IPR001653 GO:0008837|GO:0009089
Bach8g00715 363 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 60 362 IPR001653 GO:0008837|GO:0009089
Bach8g00715 363 SUPERFAMILY Diaminopimelate epimerase-like 78 207 - -
Bach8g00715 363 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 213 347 - -
Bach8g00715 363 FunFam Diaminopimelate epimerase chloroplastic 202 350 - -
Bach8g00715 363 NCBIfam diaminopimelate epimerase 79 361 IPR001653 GO:0008837|GO:0009089
Bach8g00715 363 SUPERFAMILY Diaminopimelate epimerase-like 223 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00715 Bach-Chr8 4763015 4766566 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00715 K01778 - gmx:100807528 578.556