Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00679 ATGGCGAAGATGTCCTCCGATTCATCCATTGCTTCTCTTCCTGAAAACTCCATCGTTCTGGGATGCGGAGCGGTGTCGGTGGATTTCTTGGCTACGGTTGCTGCTTATCCGAAGCCAGATGACAAGATTAGAACCACCAATTTGAAGGTTCAAGGGGGTGGCAACGCCGGTAATGCTTTAACATGTCTTGCTCGCTTGGGCCTAAAACCAAGGCTCATCTCCAAGGTTGCAGATGACACTCAAGGCAGGGGCATATTAGATGAGCTTGACGCTGATGGTGTAGATACATCCTATTTTGTGGTCTCCAGGGAGGGCACTTCACCATTTACCTACATAATTGTAGACAATCAAACGAAGACCCGTACTTGTATACATACCCCAGGACATCCTCCAATGGTGCCAGATGATCTTTCTGAATCAAGTTTGTTGTCTGCATTAAATGGAGCTAGAATAGTTTATTTTGATGGGAGGATGCATGAAACCGCTCTTGTTATTGCACAAGAGGCAGTTCGGAAAAATATTCCCATCTTAATTGATGCTGAAAGGCTGAGGGAAGGGCTGGATGATCTCCTGAAATCAGCTGATTATGTTGTATGCTCGGAAAAATTTCCACAGGCAAGTGCATTGTTCTCTATAAAAGCATGGACAGAGGCACCAACTATTCCAAGAGCAGTTGTTTCTATGCTTTTAAGGTTGCCCAAGATCAAATTTGTGATTGTAACCTTGGGAAAAGACGGTTGCATAATGCTTGAGAGAAATGCTAGTGAGGGTCATCCAACAGAAGAAGTGGATGTAGACGGGTTACTGGAATCACTAGAGATGAGAAGGAACAAGAACATAACCATCCCAACCTGTATATCATCGTCAGTAACAAAATTGAAGGCTGAAGGGATAGGAACAGTTTGTGGGAGGTTATATGTCGGAACAGCTGAGAACATACCACCATCAGAGCTTGTTGATACCACTGGTGCTGGAGATGCATTTATTGGAGCCGTTCTCTATGCTATCTGTGCCAACTTTTCACCAGAGAAAATGCTGTCTTTTGCTGCCACTGTGGCAGCCGCCAAGTGCAGAGCTTTAGGAGCACGAAGTGGTCTTCCGTACCGTGCAGACACACGCCTGGCATCCTTCTTGCACTAG 1140 0.4553 MAKMSSDSSIASLPENSIVLGCGAVSVDFLATVAAYPKPDDKIRTTNLKVQGGGNAGNALTCLARLGLKPRLISKVADDTQGRGILDELDADGVDTSYFVVSREGTSPFTYIIVDNQTKTRTCIHTPGHPPMVPDDLSESSLLSALNGARIVYFDGRMHETALVIAQEAVRKNIPILIDAERLREGLDDLLKSADYVVCSEKFPQASALFSIKAWTEAPTIPRAVVSMLLRLPKIKFVIVTLGKDGCIMLERNASEGHPTEEVDVDGLLESLEMRRNKNITIPTCISSSVTKLKAEGIGTVCGRLYVGTAENIPPSELVDTTGAGDAFIGAVLYAICANFSPEKMLSFAATVAAAKCRALGARSGLPYRADTRLASFLH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00679 379 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 3 379 - -
Bach8g00679 379 PRINTS Ribokinase signature 48 67 IPR002139 GO:0016301
Bach8g00679 379 PRINTS Ribokinase signature 21 42 IPR002139 GO:0016301
Bach8g00679 379 PRINTS Ribokinase signature 189 204 IPR002139 GO:0016301
Bach8g00679 379 PRINTS Ribokinase signature 238 249 IPR002139 GO:0016301
Bach8g00679 379 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 320 333 IPR002173 GO:0016301
Bach8g00679 379 CDD ribokinase_group_B 18 368 - -
Bach8g00679 379 Pfam pfkB family carbohydrate kinase 23 261 IPR011611 -
Bach8g00679 379 Pfam pfkB family carbohydrate kinase 310 367 IPR011611 -
Bach8g00679 379 Gene3D - 18 364 IPR029056 -
Bach8g00679 379 SUPERFAMILY Ribokinase-like 18 371 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00679 Bach-Chr8 4500818 4504974 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00679 - - ccaj:109795876 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00679 8 4500818 4504974 Bach8g00679 8 4500818 4504974 ECH