Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00663 GCAGCAGAATCCATTCTAGCTCACTCTCTCAGTTATCACCTTGCACTCTAACTCTCCACTCTCTTTTTGAGCTGATCTATTCGAGATTACTCATTTGCTTTCTTGATTCAGAAGATTCGTCTCTCTGAGCGAAGGTTTCTCTCCGTCTCTTTCTGCCTCTTTCGCGTCTTCAACTTCCAACAATATTTCTTTTGGAGCTTTGCATTGGGACTGGCGACTTTCTCTTTAGGATTTTAGGGTTTCAGATACTGAAGATTCTCCTACAGGATCTGCCACCGTCTTTAGAGGAACACAATTTTACCAGCACTTCATGTTTTTCTAGAGAGACGCACTAAATACTGAACCAGAAGTAGGTTAAAAATGGCGTCTACGTATCCACCACGCAGACTTAGTGCCGCTGAGGTGGGTTCGTACTTCGTTGCTAAGTATTATCAAGTGCTTCAGAAACATCCCGAGCAGGTTCATCAGTTCTACTCTGATTCCAGCTGTATGATTCGTGTTGATGGAGATTCCAGCCAATCTGCCTCTGCCATACTGCAAATTCATACGCTGCTCCTGTCACTGAATTATAATGGAATTGAGATCACAACAATCAATTCGCTTGATTCTTGGAATCATGGAGTCCTTGTGATGGTTTCAGGTCTTGTTAAGATCAGGGATGTGAAGAGGAAGTTTGTTCAAACCTTTTTTCTTGCTCCTCAGGACAATGGTTACTTTGTGCTGAATGATATTTTTCAGTTCAATGACGATGAAATGATCTACCCAAATCCGGTAGCCTTGACATCTGAAAATATTGAGACACAATTGAATGCATCTAATTCTCTTGCAGAGCCATCTGCGTCAGACTACAGTTTGGAGGAAGAGGCTAGTAAATACGTTGACTCAGTTGATATAGAAGATGATCCAGTGGACAAGTACAATCTTCCAGAGCAGCAGCTGCAGAACCTACAACAGGATCTTGAAACTGAAAATGTGGAGGAAGAAACTCCTGCAGAGGAGGCACCTCCGTCAATTCAAATTGTGAGGCATACAATCAATGAACCCCCTGTAGCTTCTGTGGAGGAACTTGTGGAAGAACCAGCTAAGAAGACTTATGCATCTATTTTACAAATCTCTGGAGGGAAAGCTGTGTTGCCAGCTGCTCCACAACCATCGTTTAGAAGTGCCCCAACCCCTTCAGACTTAAATCATGCTGCTCAGTCTACTGTTCAGCAGTCAAGTTCTACATCTATACCTGTTTCTCACTCTATGGTTGAGCCGGCAGATGAAGGCTTTGGCCAAGATGAAGGTGAAGTAAAATCTGTTTATGTGAGAAACTTGCCTGCTACTGTTACTGAAGCTGATATTGAACAGGAGTTTAAGAACTTTGGCAGAATTAAGCAGGATGGAATATTTATTAGAGTCCGAAAGGAAATTAATGCTTGCTATGCTTTTGTGGAGTTTGAAGACATTCTTGGTGTTCAAAATGCCCTCGAGGCTTCTCCCATAGAGTTGGCTGGAAGACATGTATTCATAGAGGAGCGGAGACCAAACAGTGGCAGCACTACACGGGGAGGAAGACGTGGAAGAGGAAGAAGCAGTTATCAAACAGATGCTCCAAGAGGGCGTTTTGGTGCTCGGAGTTTTGGTAGAGGAAGTAATCAAGATGCTGGAGACTATAACAGATTCAGAGGCAACGGTTATCCTCAATACGGTTCTCGATAGGATAACATCTGGGAAAGCACGTATGAGGAGAGTATTTATGGGCCTTTACTTAAATCTGAGGTTGATTGGGTATTTAAATTGGAACATTTTCCTAATATTTCCGGCATGTCATTGTGTGAAGTCATTGACACTTATTTATTTTGCAAGTATAGGACAGTTTGTTCCCCTTGAATGTTTTTTATTATGCAAATCAAGTGGGAAATTTTGGACATTTACAGCTCTGTGTTGGTGAGTGATTGTGAAGCTTTTCATGAGAGGAAGGTGGTCCAACGGAAAATGGTTTAGACAAACACGGAGATTGTCTTGAATTCGCAGTTGTTTTAGGCATTATTTGGTGTGCTTTATTACTGCCCAATTTTTTTTTTAGTTAGATGATGGAAAAGAATATTGAAATCTTGACGTATTGCATACTATCTACAACGGACCAAATCTTTGGTTACTAATAGGGATGGTTTATTACTGCTCTATTTTGATATCAAATTTAATGGTGCATATTCGATATATTATAAGTGAGACATTTT 2225 0.4112 MASTYPPRRLSAAEVGSYFVAKYYQVLQKHPEQVHQFYSDSSCMIRVDGDSSQSASAILQIHTLLLSLNYNGIEITTINSLDSWNHGVLVMVSGLVKIRDVKRKFVQTFFLAPQDNGYFVLNDIFQFNDDEMIYPNPVALTSENIETQLNASNSLAEPSASDYSLEEEASKYVDSVDIEDDPVDKYNLPEQQLQNLQQDLETENVEEETPAEEAPPSIQIVRHTINEPPVASVEELVEEPAKKTYASILQISGGKAVLPAAPQPSFRSAPTPSDLNHAAQSTVQQSSSTSIPVSHSMVEPADEGFGQDEGEVKSVYVRNLPATVTEADIEQEFKNFGRIKQDGIFIRVRKEINACYAFVEFEDILGVQNALEASPIELAGRHVFIEERRPNSGSTTRGGRRGRGRSSYQTDAPRGRFGARSFGRGSNQDAGDYNRFRGNGYPQYGSR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00663 447 Pfam Nuclear transport factor 2 (NTF2) domain 15 127 IPR002075 -
Bach8g00663 447 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 315 373 IPR000504 GO:0003723
Bach8g00663 447 FunFam Nuclear transport factor 2 family protein 303 441 - -
Bach8g00663 447 CDD RRM_SF 315 386 - -
Bach8g00663 447 Gene3D - 7 132 - -
Bach8g00663 447 MobiDBLite consensus disorder prediction 261 294 - -
Bach8g00663 447 MobiDBLite consensus disorder prediction 267 294 - -
Bach8g00663 447 SUPERFAMILY NTF2-like 12 130 IPR032710 -
Bach8g00663 447 MobiDBLite consensus disorder prediction 387 447 - -
Bach8g00663 447 SMART rrm1_1 314 386 IPR000504 GO:0003723
Bach8g00663 447 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 11 433 IPR039539 -
Bach8g00663 447 MobiDBLite consensus disorder prediction 389 403 - -
Bach8g00663 447 SUPERFAMILY RNA-binding domain, RBD 303 418 IPR035979 GO:0003676
Bach8g00663 447 FunFam Nuclear transport factor 2 family protein 6 131 - -
Bach8g00663 447 Gene3D - 294 443 IPR012677 -
Bach8g00663 447 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 313 390 IPR000504 GO:0003723
Bach8g00663 447 CDD NTF2 11 129 IPR018222 -
Bach8g00663 447 ProSiteProfiles Nuclear transport factor 2 domain profile. 15 127 IPR018222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00663 Bach-Chr8 4357963 4363776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00663 - - gmx:100787900 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00663 8 4357963 4363776 Bach8g00663 8 4357963 4363776 ECH