Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00576 TTTGACCCTGAGCCTCTGCTTAGCTACGCTTCTCTTTCATCTTCAAAGGAGAGCTCTTGGAGACTTTCACAGGCGCTTGAATTTCTGTGAACAAGCTCATACTTCTATATTCAATTAATCTCTTTCGTCTTTCTCTTGTCTTCGGTCAGAACAGATATACAGAACTCCCTTCAGGTGAAATTTCTCTGCGGCAGACAACCATTTTTTATGGCCATTGCCCTGAAATCGGCTAGCTTCTTCCAATTGAAGAAAACTGAGATCAATTTCCAGGTTCGTGTTCCCTACAGGAAATCCATAATATCTATAAGAAGGTGCGCTCCTATGGCGGCTATAAGCACCGCACCAACTGTTGGGCTCTCTGAAACATTCACAAGACTGAAAAAAGAAGGAAAAGTGGCTTTAATCCCATACATTACTGCTGGGGATCCTGACCTTTCAACCACAGCAGAAGCATTGAAGGTGCTTGATTCATGTGGGTCTGACATAATCGAGCTAGGTGTTCCTTACTCTGATCCCTTGGCGGATGGTCCTGTTATCCAGGCTGCTGCTACGCGTTCCTTAGCAAGGGGGACCAATTTCGATTCAATTATTTCTATGTTGAAAGAGGTAGTTCCCCAGTTATCTTCTCCAATTGCACTGTTTTCTTATTACAACCCAATACTCAAGCGTGGTACTGAGAGATTTATGTCCACCATACGAGATACCGGTGTACATGGGCTTGTGGTCCCAGATGTTCCTTTGGAAGAGACAGTAACTTTAAGGACAGAAGCTAAGAAGAATGGGATTGAACTGGTACTCCTTACAACACCCACTACTCCAACAAATCGCATGAAAGCCATTGTTGAAGCTTCAGAAGGCTTCGTTTATCTTGTGAGCTCAGTGGGGGTTACTGGAGCCCGATCATCAGTAAGTTCTAAAGTGCAGTCTCTCTTGGCGGAAATTAAAGAGGAAACAACCAAGCCTATAGCGGTAGGTTTTGGCATATCAAAACCTGAACATGTGAAACAGGTAGCTGGATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCCATGGTGAAGTTGCTTGGTGAGGCCAAATCTCCACAGGATGGGTTGAAAGAACTTGAAGATTTCACCAAATCCTTGAAATGTGCACTTGTTTGAAGACAAGCTCAAGAGATCAAACTTGTTATAGTTTTCATCTCCAATAGATGATGGAGTCAGTTGAGGATAACTAGTTTGGATTTTGTGAAGTAAATGGTTTTCATATGTTTTAATATCCTCCCTAATCTTTAA 1275 0.4298 MAIALKSASFFQLKKTEINFQVRVPYRKSIISIRRCAPMAAISTAPTVGLSETFTRLKKEGKVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFDSIISMLKEVVPQLSSPIALFSYYNPILKRGTERFMSTIRDTGVHGLVVPDVPLEETVTLRTEAKKNGIELVLLTTPTTPTNRMKAIVEASEGFVYLVSSVGVTGARSSVSSKVQSLLAEIKEETTKPIAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAKSPQDGLKELEDFTKSLKCALV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00576 311 Pfam Tryptophan synthase alpha chain 54 308 IPR002028 GO:0004834|GO:0006568
Bach8g00576 311 Gene3D Aldolase class I 49 311 IPR013785 -
Bach8g00576 311 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 41 310 IPR002028 GO:0004834|GO:0006568
Bach8g00576 311 CDD Tryptophan_synthase_alpha 64 307 IPR002028 GO:0004834|GO:0006568
Bach8g00576 311 FunFam Tryptophan synthase alpha chain, chloroplastic 48 311 - -
Bach8g00576 311 SUPERFAMILY Ribulose-phoshate binding barrel 50 289 IPR011060 -
Bach8g00576 311 ProSitePatterns Tryptophan synthase alpha chain signature. 94 107 IPR018204 GO:0004834
Bach8g00576 311 Hamap Tryptophan synthase alpha chain [trpA]. 60 309 IPR002028 GO:0004834|GO:0006568
Bach8g00576 311 NCBIfam tryptophan synthase subunit alpha 54 307 IPR002028 GO:0004834|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00576 Bach-Chr8 3763918 3768077 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00576 K01695 - qsa:O6P43_006959 490.345