Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00531 ATGAGTGTTGAGGTGTTACGCTTATGGGTGCCCAAGTCCTGTTGTTCTATGCTTGGCCAATTTGTTCCTAGTCCTAACGGAGGCAGATTCTCCCCAACAGCGCTATCAGCCACAGCAACACCCTCGCCCCAATCTCCCTCCATTAAGATAGTTGGTGTGAAAAGTCCAAGTTGGAGTGGAAATGGATATGGCAATTCCAACACATTCGATGGCTTTGAAGGGGAGAGTGATTGGACTGATCTTGAAACTGATCTTTATTACTGGTCAAAGGCATTGCGTCCAGTGCAGTGGTATCCTGGTCACATTGCAAAAACAGAGAAAGAACTTAAGGAGCAGCTCAAGTTGATGGATGTTGTCATAGAAGTTCGGGATGCCCGTATTCCTATGTCCACCAGTCATCCACAGATGGATTTATGGCTTGGCAATAGAAAAAGAATTTTGGTTTTGAATAGAGAGGACATGATATCCACGACAGACCGCAATGCTTGGGCAACATATTTTGCTAGGCAAGGAACAAAGGTTGTCTTCTCCAACGGGCAATTTGGAATGGGCACAATGAAGCTAGGCCGGTTAGCAAAGTCATTAGCAGCTGATGTAAATGTTAAACGTAGAGCCAAAGGGCTACTTCCTCGTGCAGTTCGAGCTGGAATAGTTGGATATCCTAATGTTGGGAAGTCATCCTTGATCAACCGTTTGTTAAAGCGAAGAATGTGTCCAGCAGCTCCAAGGCCAGGTGTCACAAGACAATTGAGGTGGGTCCGTTTCGGGAAAGATCTTGAATTGCTTGACTCTCCTGGGATAATCCCAATGCGAATCAGTGATCAGTCAGCTGCTATAAAACTTGCCATATGTGACGACATTGGGGAGCGATCCTATGATGCTGTGGATGTTGCTGCAATTCTTGTCCAGATGCTTACAAGGCTTCCCTCCGTAGGTGGAGATGCGCTTCGTAAACGGTACAAGATTGATGTAGACAGTCACTCCGGTAAAATATTTATAGAAAAGCTTGCGCTTCATTTTTTTAATGGAGATGTTCATCAAGCAGCATACCGTGTCCTGGCAGACTTTCGGAAAGGCAAGTTTGGTTGGACTGCACTCGAGGGGCCTCCTAGTTGATTTCGTTGGACTTGGAAGTTTGCTTTGAAAAGTAGAATCTGTATCTGGTGCATCTTGAATCGCAGCATTCAATCGCACGCGAAGATAAATGTATTATGTACGTTAGAAGGTGTAACATGACATCATGGAAGAGAAAGCTTGTGAACGTGTTATCACAAGACAACGCCGTTCGGAGAGTTAGTTGCTTGAGGTACTGAAAGCAAAGAATTTGGCGCAAATTAAGGTTTCCTGCCGTACTATTGAATATAGTGGTCGTGATTCCACACAGTCTTTCGGCCTGGGTCTTTTAATAAGACAAGTGACAACTAGGCGGCTTGGGATTTTGTATGGTTATTTGTGGTGTTGTAAATTAAATCTGGTTGACTTTCTAAAAATGATTTGAGGAAAGTATAGCGTG 1513 0.4428 MSVEVLRLWVPKSCCSMLGQFVPSPNGGRFSPTALSATATPSPQSPSIKIVGVKSPSWSGNGYGNSNTFDGFEGESDWTDLETDLYYWSKALRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPMSTSHPQMDLWLGNRKRILVLNREDMISTTDRNAWATYFARQGTKVVFSNGQFGMGTMKLGRLAKSLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRQLRWVRFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDAVDVAAILVQMLTRLPSVGGDALRKRYKIDVDSHSGKIFIEKLALHFFNGDVHQAAYRVLADFRKGKFGWTALEGPPS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00531 371 PRINTS GTP1/OBG GTP-binding protein family signature 261 276 IPR006073 GO:0005525
Bach8g00531 371 PRINTS GTP1/OBG GTP-binding protein family signature 215 235 IPR006073 GO:0005525
Bach8g00531 371 FunFam DAR GTPase 3 chloroplastic 95 268 - -
Bach8g00531 371 CDD YlqF 97 267 - -
Bach8g00531 371 Gene3D - 95 268 IPR027417 -
Bach8g00531 371 Gene3D - 273 361 IPR023179 -
Bach8g00531 371 Pfam 50S ribosome-binding GTPase 215 284 IPR006073 GO:0005525
Bach8g00531 371 FunFam Mitochondrial GTPase 1 273 361 - -
Bach8g00531 371 NCBIfam ribosome biogenesis GTPase YlqF 95 367 IPR019991 -
Bach8g00531 371 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 82 370 - -
Bach8g00531 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 286 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00531 Bach-Chr8 3423230 3427105 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00531 K19828 - qsa:O6P43_010631 588.186