Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00460 ATGAGTAGCTTAACGACGAGCTTGTCAGCTCGAATATGTACTATGCGTTGCGACCTAATCCCCTTTAAACATTGTCCACTTCACCGATGGGTAAAAACATGCGTTACTCTTTCACCTCGAACCAAACTCAGAGCTCCAAAAATTGTGTGCATGGCGGCGGAACCTTATTTGATAACAAAGCTTGAATCCTCGGAGAAGACATGGAAAGAATTATCTGCCAAGCTTGCTGATCCAGACGTTGTATCCAATCCCAGTGAGTACCAAAAGTTGGCACAATCAATGGCCGATCTTGATGAGGTTGTGTCGACTTTCAGGAAATTTAAGGACTGTGAGAAGCAGCTAGAAGAAACTAGAGCATTAGCAAAGGATATTGGCAATGATGAGGATATGGCAGAAATGATAGCTTCTGAAATTGAGTCTTTGTCCAAGAAACTCGGTGAGCTTGAGGAGAAGCTTAAGGTCCTATTGCTTCCCAGTGATCCTCTTGATGCGAGAAATATAATGCTTGAAGTACGAGCAGGCACTGGTGGGGATGAGGCTGGACTTTGGGCTGGTGATCTTGTCCGAATGTATCAAAAGTATTGTGAGCTGAATTCTTGGAAGTACTCACCTGTCTCATGCTCTGAGGCAGAAAAAGGAGGGTTCAAAACTTATGTGATTGAGGTCAAAGGAAATTGTGTCTACAGCAAATTAAAATATGAGTCTGGTGTCCATCGAGTTCAACGTGTTCCTCAAACAGAAGCGCAGGGTCGTGTACATACTTCTACAGCAACAGTGGCCATCATGCCGGAGGCTGATGAAGTTGAAGTGGTAATTGACCCAAAAGATATTGAACTTACAACAGCACGTTCTGGTGGTGCTGGAGGGCAGAATGTCAACAAGGTAGAAACAGCTGTTGATCTTTTCCACAAACCGACGGGAATACGTATCTTCTGTACTGAAGAAAGGACTCAACTCAAGAACAAAAATCGTGCTTTTCAGCTGCTCCGTGCAAAACTATATGAGATTAAGGTAAGGGAGCAACAAGAGTCCTTAAGAAATCAACGGAAATCACAGGTTGGTACGGGTGCTCGTGCAGAAAAAATTCGGACATATAATTACAAGGATAACAGGGTTACTGACCACCGGCTGAAGATGAACTTCGAGCTCACCTCATTTCTTAACGGAGATATAGAAAATGCAGTTCAGTCTTGTGTTGCGATGGAGCAAAAGGAGCTTCTGGAAGAACTTGCCGAATCCGTAGGTGCTCCGGCTGGGTGA 1260 0.4421 MSSLTTSLSARICTMRCDLIPFKHCPLHRWVKTCVTLSPRTKLRAPKIVCMAAEPYLITKLESSEKTWKELSAKLADPDVVSNPSEYQKLAQSMADLDEVVSTFRKFKDCEKQLEETRALAKDIGNDEDMAEMIASEIESLSKKLGELEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGLWAGDLVRMYQKYCELNSWKYSPVSCSEAEKGGFKTYVIEVKGNCVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEIKVREQQESLRNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLNGDIENAVQSCVAMEQKELLEELAESVGAPAG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00460 419 FunFam Peptide chain release factor 1 163 273 - -
Bach8g00460 419 Pfam PCRF domain 65 259 IPR005139 GO:0006415
Bach8g00460 419 Hamap Peptide chain release factor 1 [prfA]. 57 411 IPR004373 GO:0006415|GO:0016149
Bach8g00460 419 FunFam Peptide chain release factor 1 335 414 - -
Bach8g00460 419 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 283 299 IPR000352 GO:0003747|GO:0006415
Bach8g00460 419 SMART PCRF_a_2 119 234 IPR005139 GO:0006415
Bach8g00460 419 Gene3D - 163 273 - -
Bach8g00460 419 SUPERFAMILY Release factor 66 407 IPR045853 -
Bach8g00460 419 Coils Coil 131 151 - -
Bach8g00460 419 Gene3D - 336 417 - -
Bach8g00460 419 PANTHER LD18447P 53 413 - -
Bach8g00460 419 Gene3D - 274 335 - -
Bach8g00460 419 Pfam RF-1 domain 266 376 IPR000352 GO:0003747|GO:0006415
Bach8g00460 419 FunFam Peptide chain release factor 1 273 338 - -
Bach8g00460 419 NCBIfam peptide chain release factor 1 54 412 IPR004373 GO:0006415|GO:0016149
Bach8g00460 419 Gene3D - 45 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00460 Bach-Chr8 2934473 2939322 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00460 K02835 - gmx:100777225 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00460 8 2934473 2939322 Bach8g00460 8 2934473 2939322 ECH