Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00395 ATGACCAGAGCCCTTTTAGTTTTCTCCTTTCAGGTGGCTGTAGTTTTACTTTTAGCATTAAGCACTGCACTAGAGAGTAAAGGCGAAGAAAACGGTGAATCATGTAAATATAAAACATTGGATGCCAGGCCTCATAGCGTGTCAATCTTGGAATTTGGGGCAGTTGGAGATGGAAAAACATTAAACACGGTTGCATTTCAGAATGCAATTTTTTATCTCAAGTCCTTTGCCGACAAAGGGGGTGCTCAGCTATATGTTCCATCAGGCAGATGGCTTACCGGAAGTTTTACTCTAACCAGCCACTTAACTCTCTTCCTTGAGAAAGGAGCTACCATTATTGCATCTCAGGATTTTGCACATTGGGGTATATTGGATGCCCTTCCTTCTTATGGTCGAGGAATAGATGTTCCCTTTGGGAGATATCGTAGCTTGATTTATGGACAAAATTTAAGTGACGTGGTGATTACAGGCAGGACATCTCTCCATTACATATACTCTCATTTTAAGCAATTCCTTGGTGATAATGCAACTATTGATGGCCAGGGTTCTGTTTGGTGGGAGCTGTTCAATTCTCACTCCTTAAATTACAGCAGACCACATCTTGTGGAATTTATTAGTTCTGAAAGTATCATTATCTCAAATTTGACATTCTTAAATTCTCCGGCGTGGGATATCCATCCAGTATATTGCAGAAACGTTCAAATCCATAACATAACGGCTTATGCCCCAGCTGAATCCCCTCATACGAGCGGAGTAGTTCCAGATTCTTCCAAGTATGTTTGTGTAGACAAGAGCAATATTAGCACAGGTCATGACGCCATTGTGCTAAAAAGTGGTTGGGATGAGTATGGAATTGCCTATGGCGAGCCAAGCTTGAGTGTCCACATCAGGGATGTTCGCCTAAAATCATCCTCAGGTGCTGGCCTGGCATTTGGGAGTGAGATGTCTGGAGGCATATCCCATGTAATTGTAGAGCAGCTTCATGTGCTTGACTCGCTTATTGGCATTGAATTCAAAACAACTAGGGGTAGAGGTGGTTATATGAAAGATGTCCAAGTATCAGGTGCAGAACTCGCAAACATTTACTTGGCGATCAGCATGAATGGTTACCATGGTTCCCACCCAGATGACAAATTTGATCCTGACGCACTTCCAGTTGTTGATGGCATTGCTTTTAAGAATGTGGTTGGTGCAAATGTTACTATTGCCGGGAATTTTTCGGGAATAGTTGATTCACCATTCACCTCAATCTGCCTTTCAAACGTGACCATTTCCATTAGTTCTGGAAAATCTCCTTCATGGTTTTGTTCTAATGTAAAGGGTTCCTCTGAGAAGGTGTTTCCTAAACCGTGTCCTGATCTCCAGAGCTCATACTCGGAATTTTCCTTTTCTTGCACTTCTTCCCCATATCCACCACATGGTTATATCTCAAGCTTATAA 1440 0.4215 MTRALLVFSFQVAVVLLLALSTALESKGEENGESCKYKTLDARPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADKGGAQLYVPSGRWLTGSFTLTSHLTLFLEKGATIIASQDFAHWGILDALPSYGRGIDVPFGRYRSLIYGQNLSDVVITGRTSLHYIYSHFKQFLGDNATIDGQGSVWWELFNSHSLNYSRPHLVEFISSESIIISNLTFLNSPAWDIHPVYCRNVQIHNITAYAPAESPHTSGVVPDSSKYVCVDKSNISTGHDAIVLKSGWDEYGIAYGEPSLSVHIRDVRLKSSSGAGLAFGSEMSGGISHVIVEQLHVLDSLIGIEFKTTRGRGGYMKDVQVSGAELANIYLAISMNGYHGSHPDDKFDPDALPVVDGIAFKNVVGANVTIAGNFSGIVDSPFTSICLSNVTISISSGKSPSWFCSNVKGSSEKVFPKPCPDLQSSYSEFSFSCTSSPYPPHGYISSL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00395 479 Pfam Glycosyl hydrolases family 28 175 440 IPR000743 GO:0004650|GO:0005975
Bach8g00395 479 Pfam Pectate lyase superfamily protein 47 124 IPR024535 -
Bach8g00395 479 Gene3D - 26 447 IPR012334 -
Bach8g00395 479 PANTHER PECTIN LYASE-RELATED 15 463 - -
Bach8g00395 479 SUPERFAMILY Pectin lyase-like 41 455 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00395 Bach-Chr8 2568801 2570822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00395 8 459 Glycoside Hydrolase AT3G16850 59.382 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00395 - - gmx:100801823 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00395 8 2568801 2570822 Bach8g00395 8 2568801 2570822 ECH