Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00334 AAAACTTCGTCTTCCTCCTTGATTGTTTTATATGATTGCGCTGTCACTTAACCCTAGCTTCTCTGTTTCGTGTGTGAATCCCAAATCAACCCCAAATAATTAGCGACTTGTGAGGGGATCTTCTCGAATTTTGCTGGGACCGACGTCCTTACCTGTCTGGACTCTGCTGTTCTTCGGTATTAGGGTTCCATGGGTACTGAGAGAAAGAGGAAGGTGAGCTTATTCGATGTGGTAGATGAGACTGCGGCTAAGATTCCTAAAGTTAATGGTGGAGTTGTCAACGCTAACAACAGCGTTGGTAACAGTATCATTAATGGGTGGAATGGGAGACCTTACTCCCAGAGATATTATGAAATATTGGAGAAGAGGAAGACCTTGCCGGTTTGGCACCAGAAGGAGGAGTTCTTGCAAGTTTTGAAGGCTAACCAGACTTTGATTTTGGTTGGTGAGACTGGTAGCGGTAAAACTACACAGATTCCTCAGTTTGTTTTAGAAGCTGTTGATATAGAAACCCCTGATAAACGCAGGAAGATGATGATTGCGTGCACTCAACCTCGGAGAGTGGCTGCAATGTCTGTTTCCAGACGTGTTGCTGAAGAGATGGATGTAAATATAGGAGAGGAGGTTGGTTACAGCATCAGATTTGAAGATTGTAGTAGTGCGAGGACAGTTTTAAAGTATCTCACAGATGGTATGCTTTTAAGAGAGGCAATGACAGATCCACTTTTGGAACGGTACAAAGTGATTATTCTTGATGAGGCTCATGAAAGGACTTTGGCTACAGATGTGCTATTTGGCCTTCTGAAGGAAGTGCTTAAAAATAGACCTGACTTGAAGTTGGTTGTGATGAGTGCAACACTTGAGGCAGAGAAGTTCCAGGGCTATTTTTATGGTGCCCCCCTTATGAAAGTTCCTGGAAGGCTTCATCCTGTGGAAATCTTCTATACTCAGGATCCTGAAAGGGATTACTTGGAGGCTGCTATTAGGACAGTGGTGCAGATACACACGTGTGAGCCTCCTGGAGATATACTTGTTTTTCTTACAGGAGAGGAAGAGATAGAAGATGCATGCCGCAAAATATCAAAAGAAATTGGAAATATGGGAGACCAGGTGGGCCCTGTGAAAGTGGTACCTCTATATTCTACGCTTCCTCCAGCTATGCAGCAGAAAATATTCGAGCCAGCACCATCTCCAGTGAAAGAAGATGGGCCTCCTGGAAGGAAAATTGTGGTATCAACAAACATAGCAGAAACCTCTTTGACAATTGATGGAATAGTCTATGTTATTGATCCTGGCTTTGCTAAGCAAAAGGTTTATAACCCACGAGTACGTGTTGAGTCATTGTTGGTATCTCCAATATCGAAGGCTAGTGCACACCAGAGGTCTGGGCGTGCTGGAAGAACTCAACCAGGGAAATGCTTCAGGCTTTATACGGAGAGAAGTTTTAATAATGATCTTCAGCCGCAGACCTATCCTGAAATTTTGAGATCGAATCTTGCCAACTCAGTTCTTACCTTGAAGAAATTGGGTATAGATGATCTAGTGCATTTTGATTTCATGGACCCTCCTGCCCCTGAGACCTTGATGCGTGCTTTGGAAGTGTTAAACTACTTGGGTGCACTTGATGATGATGGTAACATAACAAAGCTGGGTGAAATTATGAGTGAATTTCCTTTGGATCCTCAGATGTCCAAGATGCTCGTTGTCAGTCCTGAATTCAACTGTTCAAATGAGATTCTGTCAATCTCAGCAACGCTCTCAGTACCCAATTGCTTTGTCCGGCCTAGGGAGGCACAAAAAGCGGCAGATGAAGCGAAAGCTAGGTTTGGACACATTGACGGGGATCATCTCACGCTCTTGAACGTGTACCATGCTTACAAGCAAAATAATGAGGATCCTTCCTGGTGCTATGATAACTTTATTAATCATAGGGCATTGAAAGCTGCTGATAATGTTAGACAGCAGCTAGTGCGAATCATGGCCCGGTTTAACCTGAAGTTGTGTAGCACCGATTTTAACAGCCGTGATTACTATGTCAACATTAGAAAGGCTATGCTAGCTGGGTACTTCATGCAGGTTGCTCACCTTGAGCGCACTGGGCACTACTTGACAGTGAAAGACAATCAGGTGGTGCACTTGCATCCATCTAACTGTCTCGACCACAAGCCTGAATGGGTCATCTACAATGAATATGTGCTCACCAGTAGGAATTTTATTCGTACGGTCACAGATATACGTGGGGAATGGCTAGTTGATGTAGCACCACACTACTATGACCTGTCAAATTTTCCACAATGTGAAGCCAAGCGCGTCCTTGAGAGGCTTTACAAAAAGCGGGAGAGGGAAAAGGAGGAAACCAGAAATCGTAAATGAAGTCATCCACACTTTTTTCTTGGATGTTTCTTTTCCGGTTACAGAGATCAGAATTTCACTTGGTGATTTTGCCAAATACAACCCTTTAGTTACCTCTGAAGGAAATATCGTTATTATTAGTGAAAAATTTGCCAAGTTCCTCGTACCATTTGCTGGAGGATTAGCGACGTGATTTGATTGCTGTATTATTTTCCTTGTTCTGTTGTCCTTAAATTACGTTTTAGTTTTATTGGTAAGTAAAAACTGAAAGTCTGTCTCGATGTTTGATTGTTGAGTTTAAAAGGATATTACTCTTCAGAAAATGCGAATGCCTTCAGGTGCTGTGCTGTGCTGTGCTCCAAGCTCAATGCAGGACAGGGTTTTTGGCGTTATATCTGTTGTGCACCAAAGGCGTTTTCCGGAAGT 2778 0.4316 MGTERKRKVSLFDVVDETAAKIPKVNGGVVNANNSVGNSIINGWNGRPYSQRYYEILEKRKTLPVWHQKEEFLQVLKANQTLILVGETGSGKTTQIPQFVLEAVDIETPDKRRKMMIACTQPRRVAAMSVSRRVAEEMDVNIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQDPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEEEIEDACRKISKEIGNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPSPVKEDGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANSVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNITKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISATLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFINHRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCEAKRVLERLYKKREREKEETRNRK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00334 727 Coils Coil 706 727 - -
Bach8g00334 727 SMART ha2_5 467 557 IPR007502 GO:0004386
Bach8g00334 727 CDD DEXHc_DHX15 51 241 IPR044756 GO:0003724|GO:0005524
Bach8g00334 727 Gene3D - 452 608 - -
Bach8g00334 727 Pfam Helicase associated domain (HA2) 468 556 IPR007502 GO:0004386
Bach8g00334 727 Pfam Helicase conserved C-terminal domain 271 405 IPR001650 -
Bach8g00334 727 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 267 447 IPR001650 -
Bach8g00334 727 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 451 559 - -
Bach8g00334 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 613 IPR027417 -
Bach8g00334 727 Gene3D - 20 244 IPR027417 -
Bach8g00334 727 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 245 427 - -
Bach8g00334 727 CDD SF2_C_RHA 246 414 - -
Bach8g00334 727 Gene3D - 245 427 IPR027417 -
Bach8g00334 727 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 73 242 IPR014001 -
Bach8g00334 727 SMART AAA_5 78 295 IPR003593 GO:0016887
Bach8g00334 727 PANTHER ATP-DEPENDENT RNA HELICASE 50 699 - -
Bach8g00334 727 FunFam Putative pre-mRNA-splicing factor ATP-dependent RNA helicase 14 244 - -
Bach8g00334 727 SMART helicmild6 288 406 IPR001650 -
Bach8g00334 727 Pfam AAA domain 80 220 IPR003593 GO:0016887
Bach8g00334 727 SMART ultradead3 60 251 IPR014001 -
Bach8g00334 727 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 618 694 IPR011709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00334 Bach-Chr8 2218146 2222384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00334 K12820 - tcc:18613736 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00334 8 2218146 2222384 Bach8g00334 8 2218146 2222384 ECH