Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00324 ATGAAATATTCTCACGTTTCACTGCTAGAATTCTCTGTTCTTTTCATTAGTTTATTTCTTTGCATCCAAGCCAGACATTATCACAATACAAAACACAAGCACATACATTCTCATATATCATCTGGAATTTCAGTGCCTCCTGCTTTTCCTCCCGAGCCTGCTGACCCTGCTGCAGATGCTCCTAGCCCCGCTCCTGATAACCACAATTACTATAATGCCAACGGTGTTTTTGATGTAAGAACATTTGGGGCCATTGGTGATGGGTTAGCAGATGATACAGAGGCATTCAAGATGGCTTGGGACACTGCCTGCCAAAGTGAATCACTGGTTAATGTTATCCATGTTCCTCGTGGTTTTTCCTTCGTCATTCAATCTACCATCTTCACAGGTCCTTGTCAAGGTGCTTTGGTATTAAAGGTGGATGGCACTCTTATGCCACCTGATGGACCAGAATCTTGGCCTAAGAACGGCAGTAGACACCAGTGGCTTGTCTTTTATAGAATCAATGGGATGTCACTTGAAGGAGGAGGTTTAATAGATGGAAGAGGAGAAAAATGGTGGGACCTTCCCTGTAAACCTCATAAGGGACCTCATGTTACAACTTTGTCTGGACCCTGTGATAGCCCAATTGCTATAAGGTTTTTCATGGGTTCTAACTTGACTGTGCAAGGACTTAGAATCAAGAATAGTCCCCAATTCCATTTCAGATTTGATGCTTGCAAAACCGTCCATGTAGAATCAATCTACATAACAGCACCAGCACTAAGTCCAAATACTGATGGAATTCACATAGAAAATACAAATGATGTCAGAATATACAATTCTGTAATTACTAATGGTGATGACTGTGTATCCATTGGGTCTGGTTGCTATGATGTAGATATAAAGAACATGACATGTGGACCTGGTCATGGGATTAGCATTGGTAGCCTGGGCAATCACAATTCCAGAGCCTGTGTTTCAAACATCACAGTGAGAGACTCAGTGATAAAAATGTCAGATAATGGTGTTAGGATTAAGACATGGCAAGGTGGATCAGGAGCAGTCTCAGGAGTGAAATTCAGTAATATTCACATGGATAGTGTGAGGAATCCCATCATAATTGACCAGTTCTACTGCCTCACTAAGGATTGCAGCAACAAAACCTCAGCAGTTTTGGTATCAGATATAATCTACACAAACATAAAGGGAACCTATGATGCAAGGAGCCCACCTATGCATTTTGCCTGCAGTGACTCTATCCCATGCACCAATTTAACTCTCTCTGATATTGAGCTTCTTCCTGATAAGGGAGAAACAGTGCTAGATCCCTTCTGTTGGAAGGCTTATGGAAATTGGCAGACACTAACTATTCCACCAGTCTCTTGCTTGCTTGAGGGCACTTCTCAATCCATTTTAGACAATAACATATACCATTGCTGA 1422 0.4177 MKYSHVSLLEFSVLFISLFLCIQARHYHNTKHKHIHSHISSGISVPPAFPPEPADPAADAPSPAPDNHNYYNANGVFDVRTFGAIGDGLADDTEAFKMAWDTACQSESLVNVIHVPRGFSFVIQSTIFTGPCQGALVLKVDGTLMPPDGPESWPKNGSRHQWLVFYRINGMSLEGGGLIDGRGEKWWDLPCKPHKGPHVTTLSGPCDSPIAIRFFMGSNLTVQGLRIKNSPQFHFRFDACKTVHVESIYITAPALSPNTDGIHIENTNDVRIYNSVITNGDDCVSIGSGCYDVDIKNMTCGPGHGISIGSLGNHNSRACVSNITVRDSVIKMSDNGVRIKTWQGGSGAVSGVKFSNIHMDSVRNPIIIDQFYCLTKDCSNKTSAVLVSDIIYTNIKGTYDARSPPMHFACSDSIPCTNLTLSDIELLPDKGETVLDPFCWKAYGNWQTLTIPPVSCLLEGTSQSILDNNIYHC 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00324 473 PANTHER - 76 445 - -
Bach8g00324 473 SUPERFAMILY Pectin lyase-like 72 462 IPR011050 -
Bach8g00324 473 Gene3D - 65 466 IPR012334 -
Bach8g00324 473 FunFam Polygalacturonase At1g48100 family 65 460 - -
Bach8g00324 473 Pfam Glycosyl hydrolases family 28 104 427 IPR000743 GO:0004650|GO:0005975
Bach8g00324 473 SMART pbh1 320 341 IPR006626 -
Bach8g00324 473 SMART pbh1 349 370 IPR006626 -
Bach8g00324 473 SMART pbh1 267 288 IPR006626 -
Bach8g00324 473 SMART pbh1 290 310 IPR006626 -
Bach8g00324 473 SMART pbh1 240 266 IPR006626 -
Bach8g00324 473 ProSitePatterns Polygalacturonase active site. 297 310 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00324 Bach-Chr8 2153809 2155682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00324 74 467 Glycoside Hydrolase AT1G02460 72.569 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00324 - - gmx:100776338 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00324 8 2153809 2155682 Bach8g00324 8 2153809 2155682 ECH