Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00305 ATGCTTGCGTTTTTTTGGCCGCTGCCGTGCGAAAACCCTAGTCCTTGTACACACCAGAGGCGATTACAAATTGCTCGTTTGTTAGAACACCGTCTGCTTCCCCTCCGGCATCTTTGTAAGAGGTGGACATTGAGTATGGCGGGGGGTGGAGCAAAACATCCTGCATCGGGTGGTGCGAAGAAGAAGGAGGTGAAGAAAGAAACTGGTTTAGGACTTTCACATCGGAAGGCAGACAATTTTGGAGAGTGGTATTCTGAGGTGGTTGTCAATGCGGAAATGATTGAGTACTATGATATCTCTGGATGCTATATTCTGAGGCCATGGGCTATGTCAATATGGGAGATCATGCAAGTATTCTTTGATGCAGAGATAAAGAAAATGAAAATTAAGAACTGCTACTTCCCTTTATTCGTGTCTCCTGGTGTTCTACAGAAAGAGAAGGATCATGTTGAGGGTTTCGCTCCAGAGGTTGCTTGGGTGACAAAGTCTGGAGAATCTGAGTTAGAAATTCCTATTGCTATTCGCCCAACTAGCGAGACTGTCATGTATCCCTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGTGCAATGTTGTTAGATGGGAATTCAGCAATCCCACTCCATTCATCAGGAGTCGTGAGTTTCTTTGGCAGGAAGGTCATACTGCCTTTGCAACAAAAGAGGAGGCAGATACAGAGGTCCTTGAGATATTGGAATTGTATAGACGTATATATGAAGAATACTTGGCAATTCCTGTCATCAAGGGTAAGAAGAGTGAGCTGGAGAAGTTTGCTGGTGGACTGTACACTACCAGTGTTGAGTCATTCATTCCAAACACTGGTCGTGGTATTCAAGGTGCAACTTCTCATTGCCTTGGCCAAAATTTTGCTAAAATGTTTGAGATAAACTTTGAAAATGAGAAGGGAGAGAGAGCAATGGCATGGCAAAACTCATGGGCTTATAGTACTCGAACAATTGGTGTAATGGTGATGGTTCATGGGGATGACAAAGGATTGGTGTTGCCACCTAAAGTTGCATCAGTCCAAGTCATTGTGATTCCTGTGCCTTATAAAGATGCTAATACACAAGGTATTTTTGATGCCTGTTCTGAAACTGTGAATACCTTGTGTGAAGCTGGCATTCGTGCTGAGTCAGACTTCAGAGATAACTATTCTCCGGGTTGGAAGTATTCACACTGGGAAATGAAAGGCGTTCCTCTAAGGATTGAAATTGGGCCAAAGGATTTGGCAAATAAGCAGGTGCGTGCTGTTCGGCGTGATAATTCTGCAAAAATAGACATACCTAGGGATGGTTTGGTTGAAAAAGTCAAAGAGTTGCTACATGGTATTCAACAGAACCTGTTTGATGTTGCAAAACAAAATCGAGATGCTTGCATTCAGGTGATACATACTTGGGATGAATTCGTGGATGCGTTGAACCAAAGAAAAATGATTTTAGCTCCTTGGTGCGATGAGGAGGAAGTGGAAGTAGATGTGAAAGCTAGGACTAAGGGTGAGATGGGAGCAGCGAAGACCCTTTGTACACCATTTGATCAGCCAGAACTCCCAGAAGGTACCAAGTGCTTTGCCTCTGGCAAGCCTGCTAAGAAGTGGACATACTGGGGGAGAAGTTACTAGACTACTTGTTTTCTTGTGGTATTTTCTGGACTTATTTGACGATTTTGGCACCGATGGCTGAATTATGGGACACACTAAAATTGGTTTTTCCTTCATTTAAATTGAGTTTCACATCAATGTTACACGATACGTTTTTG 1799 0.4314 MLAFFWPLPCENPSPCTHQRRLQIARLLEHRLLPLRHLCKRWTLSMAGGGAKHPASGGAKKKEVKKETGLGLSHRKADNFGEWYSEVVVNAEMIEYYDISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADTEVLEILELYRRIYEEYLAIPVIKGKKSELEKFAGGLYTTSVESFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGERAMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDANTQGIFDACSETVNTLCEAGIRAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDNSAKIDIPRDGLVEKVKELLHGIQQNLFDVAKQNRDACIQVIHTWDEFVDALNQRKMILAPWCDEEEVEVDVKARTKGEMGAAKTLCTPFDQPELPEGTKCFASGKPAKKWTYWGRSY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00305 553 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 135 350 IPR006195 -
Bach8g00305 553 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 172 338 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bach8g00305 553 Gene3D - 351 471 IPR036621 -
Bach8g00305 553 Hamap Proline--tRNA ligase [proS]. 73 553 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 CDD ProRS_core_arch_euk 79 340 IPR033721 -
Bach8g00305 553 SUPERFAMILY Class II aaRS ABD-related 345 471 - -
Bach8g00305 553 Pfam Anticodon binding domain 357 454 IPR004154 -
Bach8g00305 553 SUPERFAMILY Class II aaRS and biotin synthetases 78 344 IPR045864 -
Bach8g00305 553 Pfam Prolyl-tRNA synthetase, C-terminal 480 553 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 Gene3D Bira Bifunctional Protein; Domain 2 73 350 IPR045864 -
Bach8g00305 553 NCBIfam proline--tRNA ligase 75 553 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 FunFam Proline--tRNA ligase, cytoplasmic 474 553 - -
Bach8g00305 553 Gene3D - 474 553 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 CDD ProRS_anticodon_zinc 346 553 - -
Bach8g00305 553 SMART ProRS_C_1_2 480 553 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 SUPERFAMILY C-terminal domain of ProRS 476 553 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 PANTHER PROLYL-TRNA SYNTHETASE 55 553 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 FunFam Bifunctional glutamate/proline--tRNA ligase 72 350 - -
Bach8g00305 553 PRINTS Prolyl-tRNA synthetase signature 131 149 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 PRINTS Prolyl-tRNA synthetase signature 172 183 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 PRINTS Prolyl-tRNA synthetase signature 202 210 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 PRINTS Prolyl-tRNA synthetase signature 212 223 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach8g00305 553 FunFam bifunctional glutamate/proline--tRNA ligase 351 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00305 Bach-Chr8 2033764 2040519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00305 K01881 - qsa:O6P43_010931 964.911