Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00260 ATGGATACCTTCCTGTTCACTTCTGAGTCAGTGAATGAGGGTCATCCTGACAAGCTGTGTGATCAGATTTCAGATGCAGTGCTTGATGCCTGCCTGGAACAAGATCCCGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACTAACATGGTCATGGTGTTTGGAGAGATCACAACAAAAGGCAACATTGACTATGAGAAGATTGTACGTAAAACATGCCGTAACATAGGTTTTGTTTCGAATGATGTTGGCCTTGACGCTGACAATTGTAAGGTGTTGGTCTGCATCGAGCAGCAAAGCCCTGACATTGCCCAGGGAGTCCACGGCCATCTCACCAAGCGACCTGAGGATATAGGTGCTGGCGACCAGGGTCACATGTTTGGCTATGCCACAGATGAAACTCCTGAGCTAATGCCTCTCAGCCATGTTCTTGCAACCAAGCTTGGTGCTCGCCTCACAGAAGTACGCCAGAATGGGACATGTCCTTGGTTGAGACCTGATGGAAAAACCCAAGTCACAGTAGAATATTATAATGATCATGGTGCTATGGTCCCAGTCCGTGTTCACACTGTTCTCATTTCCACTCAGCACGATGAAACTGTCACCAACGATGAGATTGCTGCTGACCTCAAAAAGCATGTTATTAAGCCAGTTATACCTGAGAAGTACTTGGATGAGAAAACCATCTTCCATCTCAATCCATCTGGGCGTTTTGTCATTGGTGGACCACATGGCGATGCAGGTCTTACTGGGCGAAAAATCATTATTGACACTTATGGTGGTTGGGGAGCCCATGGCGGTGGTGCTTTCTCTGGGAAAGACCCTACCAAGGTAGACAGGAGTGGAGCTTATATTGCTAGGCAGGCTGCAAAGAGCATTGTGGCCAGTGGACTTGCCAGAAGGTGCATCGTGCAGATCTCATATGCAATTGGTGTTCCTGAGCCCTTATCAGTGTTTGTTGACACTTATGGCACCGGAAAGATTCCAGACAAGGAGATTCTCAAGATTGTGAAGGAGAGCTTCGATTTTAGGCCTGGAATGATTGCCATCAATTTGGATCTTAAGAGGGGTGGAAATGGCAGGTTCTTGAAAACTGCTGCTTATGGCCACTTTGGCAGAGATGACCAGGACTTCACATGGGAGGTCGTGAAGCCTCTCAAGTGGGAGAAGCCCCAAGAGTAA 1182 0.4788 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKGNIDYEKIVRKTCRNIGFVSNDVGLDADNCKVLVCIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRQNGTCPWLRPDGKTQVTVEYYNDHGAMVPVRVHTVLISTQHDETVTNDEIAADLKKHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDQDFTWEVVKPLKWEKPQE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00260 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 381 IPR022630 GO:0004478|GO:0006556
Bach8g00260 393 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Bach8g00260 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bach8g00260 393 Gene3D - 4 243 - -
Bach8g00260 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
Bach8g00260 393 CDD S-AdoMet_synt 5 384 - -
Bach8g00260 393 Gene3D - 11 280 - -
Bach8g00260 393 FunFam S-adenosylmethionine synthase 134 241 - -
Bach8g00260 393 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Bach8g00260 393 SUPERFAMILY S-adenosylmethionine synthetase 115 239 IPR022636 GO:0004478|GO:0006556
Bach8g00260 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Bach8g00260 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Bach8g00260 393 Gene3D - 117 381 - -
Bach8g00260 393 NCBIfam methionine adenosyltransferase 5 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bach8g00260 393 Hamap S-adenosylmethionine synthase [metK]. 2 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bach8g00260 393 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bach8g00260 393 FunFam S-adenosylmethionine synthase 11 126 - -
Bach8g00260 393 SUPERFAMILY S-adenosylmethionine synthetase 240 389 IPR022636 GO:0004478|GO:0006556
Bach8g00260 393 FunFam S-adenosylmethionine synthase 262 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00260 Bach-Chr8 1706984 1708165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00260 K00789 - cave:132171832 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00260 8 1706984 1708165 Bach1g03056 1 40321252 40322677 ECH
Bach8g00260 8 1706984 1708165 Bach8g00260 8 1706984 1708165 ECH