Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00626 ATGGAGTCGAAGCTCTTTCGGAAATTCGTAGCGCAAAATGCGTTTACTTGCAGATCTTACTACATCAGCAGAACCAAGAAAGCGACCCTCTACTCGAAAATCAGTCCCCTTGGGAGCACAAGTGTAGTACCTGAGCTCGAAGATTGGGTCTACAAGGGGAACAAGGTCCGAGTCGCAGAGCTTCAGCGCATCATTCGTGACCTCCGAAAGCGAAGGAGGTTCACTCAAGCACTAGAGGTATCTGAGTGGATGAATAAGAATGGTGTATGCATATTTTCACATGTTGAGCATGCGGTGCATTTGGATCTGATTGGCAGGGTTCATGGATTTCCTCATGCAGAAAGCTATTTCCAGAGCTTGAAAGAACAAGATAAAACTGATAAGATTTATGGCGCACTCTTGAATTGCTATGTTCGGCAGCGCCAAATTGAAAAGTCTCTTTCCCATTTACAGAAAATGAAGGAGAAGGGCTTCGCTTCGTCACCTCTAACTTACAATGATATTATGTGTCTATACACAAATATAGACCAGCATGAGAAAGTCCCTAACGTGCTGACTGAAATGAAAAAGTACAAAGTTTTGCCTGACAACTTCAGCTACAGAATCTGTATCAATTCTTATGGTGTAAGGTCTGATATTGATGGGCTGGAAAGAACATTAAAAGAGATGGAGGGCCAATCCCACATTGTTATGGACTGGAATACGTATGCTGTTATAGCTAATTTCTATATAAAAGCAGGACTTACTAGTAAGGCAGTTGATGCCCTCAAGAAATCAGAGGAGAAGCTAGATAAGAAAGATGGTCTTGGTTACAATCATCTCATCTCCCTTTACGCCAAACTAGGAAAAAAGACTGAGGTAATGAGAATATGGGATCTTGAGAAAAGTGCTTGCAAGAGGTGCATAAACAGGGATTTTACTAACATGTTAGAATCTTTAGTGAGACTTGGTGAGCTCAATGAAGCTGAGAAAGTATTGAAGGAGTGGGAATGTAGTGGTAATTTTTATGATTTTCGAATCCCGAACATTATGATAATTGGGTATTTAAAAAATGGTTTGCATGAGAAAGCAGAAGCAATGCTTGAAAACTTGGTAGAGAAGGGTAAGACCACTACTCCGAACATTTGGACTGCAGTGGCAGGTGGATACCTGCACAAGGGTGAGATGGAGAAAGCTTTGCAGTGCTTGAAAGCAGCCCTCTCTTTGTATGTGGAAAATAAAGGATGGAAACCTAATCCAAAGGTCATCTCGGGCATATTGAATTGGCTTGGTGGTGAAGGCAGTGTTGAAGATGTAGAAGTTTTAGTGAACTCATTAAGAAATGTCATCCCAGTAAATAGACAAATGTATCACGCCTTGATCAAGGCCAACATAAGAGCTGGTAAAAACGTGGATGGACTTTTGAATAGCATGAAAATCGATAAAGTCGACGAAGATGAAGAAACTAAGCAAATTCTTAGCACGAGGCAGATCTAA 1476 0.4112 MESKLFRKFVAQNAFTCRSYYISRTKKATLYSKISPLGSTSVVPELEDWVYKGNKVRVAELQRIIRDLRKRRRFTQALEVSEWMNKNGVCIFSHVEHAVHLDLIGRVHGFPHAESYFQSLKEQDKTDKIYGALLNCYVRQRQIEKSLSHLQKMKEKGFASSPLTYNDIMCLYTNIDQHEKVPNVLTEMKKYKVLPDNFSYRICINSYGVRSDIDGLERTLKEMEGQSHIVMDWNTYAVIANFYIKAGLTSKAVDALKKSEEKLDKKDGLGYNHLISLYAKLGKKTEVMRIWDLEKSACKRCINRDFTNMLESLVRLGELNEAEKVLKEWECSGNFYDFRIPNIMIIGYLKNGLHEKAEAMLENLVEKGKTTTPNIWTAVAGGYLHKGEMEKALQCLKAALSLYVENKGWKPNPKVISGILNWLGGEGSVEDVEVLVNSLRNVIPVNRQMYHALIKANIRAGKNVDGLLNSMKIDKVDEDEETKQILSTRQI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00626 491 SUPERFAMILY TPR-like 106 401 IPR011990 GO:0005515
Bach7g00626 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 126 160 IPR002885 -
Bach7g00626 491 Gene3D Tetratricopeptide repeat domain 374 489 IPR011990 GO:0005515
Bach7g00626 491 PANTHER OS12G0527900 PROTEIN 19 478 - -
Bach7g00626 491 Pfam PPR repeat 376 397 IPR002885 -
Bach7g00626 491 Pfam PPR repeat 271 292 IPR002885 -
Bach7g00626 491 Pfam PPR repeat 342 368 IPR002885 -
Bach7g00626 491 Pfam PPR repeat 306 333 IPR002885 -
Bach7g00626 491 ProSiteProfiles TPR repeat profile. 373 406 IPR019734 GO:0005515
Bach7g00626 491 NCBIfam pentatricopeptide repeat 342 368 IPR002885 -
Bach7g00626 491 NCBIfam pentatricopeptide repeat 129 158 IPR002885 -
Bach7g00626 491 Gene3D Tetratricopeptide repeat domain 271 371 IPR011990 GO:0005515
Bach7g00626 491 SUPERFAMILY TPR-like 308 407 IPR011990 GO:0005515
Bach7g00626 491 Coils Coil 58 78 - -
Bach7g00626 491 Gene3D Tetratricopeptide repeat domain 58 270 IPR011990 GO:0005515
Bach7g00626 491 Pfam Pentatricopeptide repeat domain 150 208 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00626 Bach-Chr7 17046717 17048981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00626 29 457 EF-hand Containing Proteins AT1G02150 36.322 2.31e-88 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00626 - - jre:108990640 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g00626 7 17046717 17048981 Bach7g00626 7 17046717 17048981 ECH