LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach6g01785	ATGGACGCCTCTTCTCCCATGTCCCTCCAGAAGACGACGCCGTTTCAAGACCTCCCTGAAGCTTCCCCAAAACCATACAGGAGAAGCTTCGTCACCACTTTAATGGAAGCCGCCACTCTCCGAACCCCTTCATTCAAAGAAGATACCTACTTCATTTCCCACTTGAAGTCTTCCGAGAGGAAAGCTTTGCAAGAGCTCAAAGACAAGCTCTCAGCTTCTGAAGCCTCTGATTCCCCTATGTGGGGTATCCCTCTTCTTGGTGGGGATGGCAGAGCTGATGTGATTCTCTTGAAGTTTCTCAGAGCCAGAGACTTCCGAGTTGGAGACGCTCTCAACATGCTCCTGAAGTGCTTAGCTTGGAGGAAAGAGTTCGGAGCTGATAACATCATTGAACAAGACTTGGGTTTCAAAGAACTTGAAGGGGTAATTGCTTATATGCAAGGCTATGACAGAGAGGGACATCCTGTTTGCTATAATGCCTATGGGGTTTTCAGAGACAAAGAAATGTATGAAAGAATATTCGGAGATGAAGAGAAGCTCAAGAAATTTCTCAAGTGGAGAGTTCAGGTTCTGGAAAGAGGAATCAGCCTTCTCCATTTCAAGCCTGGAGGGGTTAACTCTATCATTCAGGTCACTGACCTCAAAGACATGCCAAAAAGGGAGCTCAGGGTAGCTTCTAATCACATCCTCTCTCTTTTCCAAGACAATTACCCTGAAATGGTGGCTCGCAAGATTTTCGTCAATGTTCCATGGTACTTCAGCATGTTGTATTCTATGTTCAGTCCATTTCTGACTCAACGAACTAAGAGTAAGTTTGTGATCTCTAAGGAAGGAAATGTTGCAGAGACACTCTACAAATTCATAAGGCCTGAGGATATTCCTGTTCAGTATGGAGGACTCAGTCGTCCTAGTGATTTGCAGAATGGTCCCCCAAAGCCTGCTTCTGATTTTACAGTTAAAGGAGGTGAAAAAGTGAACATACAAATAGAAGGAATTGAGGGAGGTGCAACAATTACATGGGACATTGTGGTTGGTGGGTGGGACTTGGAATACAGTGCAGAGTTTGTGCCTATTGCTGAAGGCAGCTATACCATAGCAGTGGAGAAACCAAGGAAGATTGGTCCCTCAGAAGAAGCAATTCACAATTCATACACTTCAAGAGAAGCTGGCAAAATGGTACTCTCTGTTGACAACACTGCCTCTAGGAGGAAAAAAGTTGCTGCCTATCGCTACATCGTCCGCAAATGCAGTACCGTCTGA	1260	0.4516	MDASSPMSLQKTTPFQDLPEASPKPYRRSFVTTLMEAATLRTPSFKEDTYFISHLKSSERKALQELKDKLSASEASDSPMWGIPLLGGDGRADVILLKFLRARDFRVGDALNMLLKCLAWRKEFGADNIIEQDLGFKELEGVIAYMQGYDREGHPVCYNAYGVFRDKEMYERIFGDEEKLKKFLKWRVQVLERGISLLHFKPGGVNSIIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKIFVNVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFIRPEDIPVQYGGLSRPSDLQNGPPKPASDFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPIAEGSYTIAVEKPRKIGPSEEAIHNSYTSREAGKMVLSVDNTASRRKKVAAYRYIVRKCSTV	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach6g01785	419	SMART	sec14_4	138	302	IPR001251	-
	Bach6g01785	419	MobiDBLite	consensus disorder prediction	1	17	-	-
	Bach6g01785	419	SMART	CRAL_TRIO_N_2	92	117	IPR011074	-
	Bach6g01785	419	CDD	SEC14	136	300	IPR001251	-
	Bach6g01785	419	SUPERFAMILY	Supernatant protein factor (SPF), C-terminal domain	317	414	IPR036598	-
	Bach6g01785	419	PANTHER	PATELLIN-1	39	415	IPR044834	GO:0008289
	Bach6g01785	419	Coils	Coil	56	76	-	-
	Bach6g01785	419	FunFam	SEC14 cytosolic factor family protein	51	123	-	-
	Bach6g01785	419	FunFam	SEC14 cytosolic factor family protein	140	315	-	-
	Bach6g01785	419	SUPERFAMILY	CRAL/TRIO domain	138	302	IPR036865	-
	Bach6g01785	419	Gene3D	-	51	123	-	-
	Bach6g01785	419	ProSiteProfiles	CRAL-TRIO lipid binding domain profile.	131	305	IPR001251	-
	Bach6g01785	419	Gene3D	GOLD domain	312	413	-	-
	Bach6g01785	419	Pfam	CRAL/TRIO domain	140	299	IPR001251	-
	Bach6g01785	419	ProSiteProfiles	GOLD domain profile.	281	415	IPR009038	-
	Bach6g01785	419	MobiDBLite	consensus disorder prediction	1	23	-	-
	Bach6g01785	419	SUPERFAMILY	CRAL/TRIO N-terminal domain	46	132	IPR036273	-
	Bach6g01785	419	Pfam	CRAL/TRIO, N-terminal domain	62	115	IPR011074	-
	Bach6g01785	419	Gene3D	-	131	311	IPR036865	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach6g01785	Bach-Chr6	28626792	28628599	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach6g01785	96	271	Acyl Lipid Metabolism Gene Families	AT5G47730	29.348	2.57e-12	65.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach6g01785	-		-	cave:132161941	755.747