Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00890 ATGGAGATGTTTCCTGGGGATAATGTGGATTATACAGCACTTGTTCAGAAAAGTCTTGTTCTTTTAATTTGTGTCTCTTTGTTTTGGAAGATCATTAGATATATGTGTGGTCTTCTCAATGTAGAGAAGGAACCTGTCACTGTGTTGGTCACTGGTGCTGCAGGGCAAATTGGTTATGCCCTTGTTCCAATGATTGCAAGGGGAGCGATGCTAGGTCCTGATCAGCCTGTAATTCTGCACATGCTCGATATAGAACCTGCAGCAGAGGCCTTGAAAGGGGTGAAGATGGAACTGATTGATTCTGCTTTTCCACTTCTTAAAGGTGTTGTTGCCACTACGGATGTTGTTGAAGCTTGCAAGGATGTCAATGTTGCTGTTATGGTGGGTGGATACCCTCGGAGGGAAGGAATGGAAAGGAAAGATGTGATGTCTAAAAATGTTTCAATCTACAAGGCTCAAGCTTCAGCCTTGGAGCAGCATGCTGCTGCTGACTGCAAGGTGCTAGTTGTTGCCAATCCTGCCAACACCAATGCTCTCATCTTGAAAGAGTTTGCCCCTTCAATTCCAGAGAAAAACATCACTTGTCTTACACGACTTGATCATAACAGAGCTCTGGGCCAAATCTCTGAGCGGCTGAACGTTCATGTTGGTGATGTCAAGAATGTCATCATCTGGGGCAATCACTCCTCAACCCAATATCCTGATGTCAACCATGCAACTGTCACCACCATCGGTGAACAGAAACCTGTCAGAGAACTTGTTGCTGATGATAAATGGTTAAACGGCGAGTTCATCACCACTGTTCAGCAGCGTGGTGCAGCCATTATTAAAGCCAGGAAGTTGTCTAGTGCACTATCTGCTGCAAGTTCTGCTTGCGATCACATACGTGATTGGGTTCTTGGAACTCCAAAGGGAACATGGGTGTCGATGGGAGTGTATTCTGATGGGTCTTATGGTATCCAACCTGGTCTCATTTACTCTTTCCCTGTTACCTGTGAAAAAGGAGAATGGAAAATTGTACAGGGGCTCAAGATCGATCAGTCTTCAAGGGAAAAGATGGATAATTCAGCACAAGAGCTCATTGAAGAGAAATCATTGGCATATTCATGCCTCAATTGA 1119 0.4459 MEMFPGDNVDYTALVQKSLVLLICVSLFWKIIRYMCGLLNVEKEPVTVLVTGAAGQIGYALVPMIARGAMLGPDQPVILHMLDIEPAAEALKGVKMELIDSAFPLLKGVVATTDVVEACKDVNVAVMVGGYPRREGMERKDVMSKNVSIYKAQASALEQHAAADCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNVHVGDVKNVIIWGNHSSTQYPDVNHATVTTIGEQKPVRELVADDKWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIQPGLIYSFPVTCEKGEWKIVQGLKIDQSSREKMDNSAQELIEEKSLAYSCLN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00890 372 Gene3D - 43 195 - -
Bach6g00890 372 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 197 365 IPR022383 GO:0016616
Bach6g00890 372 Gene3D - 196 372 IPR015955 GO:0003824|GO:0016616
Bach6g00890 372 PIRSF Lac_mal_DH 42 368 IPR001557 GO:0016616|GO:0019752
Bach6g00890 372 SUPERFAMILY LDH C-terminal domain-like 197 371 IPR015955 GO:0003824|GO:0016616
Bach6g00890 372 ProSitePatterns Malate dehydrogenase active site signature. 196 208 IPR001252 GO:0006108|GO:0016615
Bach6g00890 372 Pfam lactate/malate dehydrogenase, NAD binding domain 47 193 IPR001236 GO:0016491
Bach6g00890 372 FunFam Malate dehydrogenase 196 372 - -
Bach6g00890 372 NCBIfam malate dehydrogenase, NAD-dependent 48 369 IPR011274 GO:0006108|GO:0030060
Bach6g00890 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 195 IPR036291 -
Bach6g00890 372 CDD MDH_cytoplasmic_cytosolic 44 368 IPR011274 GO:0006108|GO:0030060
Bach6g00890 372 PANTHER MALATE DEHYDROGENASE 43 371 IPR010945 GO:0006108|GO:0016615
Bach6g00890 372 FunFam Malate dehydrogenase 43 195 - -
Bach6g00890 372 NCBIfam malate dehydrogenase 43 366 IPR010945 GO:0006108|GO:0016615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00890 Bach-Chr6 6977946 6981134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00890 K00025 - pvy:116128092 625.935