Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00560 ATGTCGTCTGCTGGTGTCACTGTACTTAGTCCACTTCCCAGGGAGCCTTTAATGTCTCCAAATGGATTCCCTACCCCCTCACACCTGTCTTTGGATGAATCAATTTGCATATTTCTCTCCTTTTCGGGGTCTATGACCCCATTGCGTGTTTTGGAGTGTGATACCATTGAGTCTGTGAAGCTCAAAATCCAGACCTGTAAGGGGTTTGTAGTCAAGAATCAGAAGTTGGTTTGTAGCGGCCGGGAACTTGCGCGAAGCAATTCCTTACTCAGGGATTATGGGGTAGCAGATGGAAATGTTTTGCATTTGGTGCTCAAGCTGTCAGAACTTCGGGTCATCAGTGTGAGAACTTATTGCGGGAAGGAGTTTACATTCCATGTGGAACGAGGTAGGGATGTTGGATATGTGAAAAGACAGATTTCCAAAAAGGAGAAACATTTTACTGATCCTGAAGAGCAGGAAGTTGTGTGTAATGGGGAACAGCTCGAGGACCAAAGGCTTATTGATGATATCTGCAAACATAACGATGCAGTGATACATCTGTTGGTCAGAAAATCTGTAAAAGTTCGTGCAAGGCCGGTTGAGAAAAATTTTGAGCTGTCCTTTGTAGCAAATGAGTTGAATGATAGGAAAGATTATGATGTTAAGGGAGATATTAATAGGAGAAACTTTGATGTCAGTGAAGAAAATACCAGAAGGGGGTACAAAGTCTTTGAAAATATTGTGCCGAGAAAGCCTCTTGATAGAGATATTCTTTTGGAGCCAGTTATTATTAACCCCAAGATTGAATTGTCTTTAGTTATTTTGGATATGATAAAGTCCTCTTATGATGGATTTAATGCTGGGAATAATCCTATCAGATCTGCTGAGGGTACGGGGGGAGCTTATTTTATGCTGGATTCAACTGGGAAAAAGTATATATCTGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTAAATAATCCTCGAGGTTTGCCTTTGTCAATAGATGGGGAAGGATTAAAAAAGGGTACAAGAGTTGGCCAAGGAGCATTCAGGGAAGTTGCAGCTTACATTTTGGATCATCCTATTACTGGGCGACGCACATTATTTGGCAATGATATGGGCTTTGCTGGGGTTCCCCCAACAGTTTTGGTTAAGTGCTTGCACAAAGGATTTAACCATCCAGGGGACTTGACTCCTAAGATTGGCTCCTTGCAGATGTTCATGGAGAATAATGGAAGTTGTGAGGATATGGGCCCTGGGGCTTTTCCAGTAGAGGAAGTACACAAGATCAGCGTATTGGATATAAGACTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTTGGCAAAGAAAAGGAAAACAATCAAACTGTGCTGATTCCAATTGATCATGGATACTGCTTGCCTGAAAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCACAAGCTCGGCAGCCATACTCCCAAGAGACTATTGAATACATCAAATCACTGGATGCTGAAGAAGACGTTGCCCTTCTTAAGTTCCATGGATGGGATTTGCCAGTTGAATGTGCCCGTACTCTTCGGATTTCAACCATGCTTCTGAAGAAAGGAGTTGAGAGAGGGCTCACCCCCTCTGCTATTGGAAGCTTGATGTGCAGGCAATCCATCAACAGGGAATCTGTGGTTGAGAAAATTGTACAAGCAGCAGAGGATTCTGTGCTTCCCGGCACAAGTGAAGCTACATTTCTGGATGCTGTTTCTGTGATCATGGACAAGCACCTTGATGAGATTGCCAATTCCCGTTCTCTTACTTGGAATTAA 1803 0.4276 MSSAGVTVLSPLPREPLMSPNGFPTPSHLSLDESICIFLSFSGSMTPLRVLECDTIESVKLKIQTCKGFVVKNQKLVCSGRELARSNSLLRDYGVADGNVLHLVLKLSELRVISVRTYCGKEFTFHVERGRDVGYVKRQISKKEKHFTDPEEQEVVCNGEQLEDQRLIDDICKHNDAVIHLLVRKSVKVRARPVEKNFELSFVANELNDRKDYDVKGDINRRNFDVSEENTRRGYKVFENIVPRKPLDRDILLEPVIINPKIELSLVILDMIKSSYDGFNAGNNPIRSAEGTGGAYFMLDSTGKKYISVFKPIDEEPMAVNNPRGLPLSIDGEGLKKGTRVGQGAFREVAAYILDHPITGRRTLFGNDMGFAGVPPTVLVKCLHKGFNHPGDLTPKIGSLQMFMENNGSCEDMGPGAFPVEEVHKISVLDIRLANADRHAGNILLGKEKENNQTVLIPIDHGYCLPESFEDCTFEWLYWPQARQPYSQETIEYIKSLDAEEDVALLKFHGWDLPVECARTLRISTMLLKKGVERGLTPSAIGSLMCRQSINRESVVEKIVQAAEDSVLPGTSEATFLDAVSVIMDKHLDEIANSRSLTWN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00560 600 SUPERFAMILY Ubiquitin-like 32 107 IPR029071 -
Bach6g00560 600 ProSiteProfiles Ubiquitin domain profile. 113 185 IPR000626 GO:0005515
Bach6g00560 600 Gene3D - 32 112 - -
Bach6g00560 600 Gene3D - 113 199 - -
Bach6g00560 600 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 44 566 IPR044571 -
Bach6g00560 600 SMART ubq_7 111 184 IPR000626 GO:0005515
Bach6g00560 600 SMART ubq_7 35 106 IPR000626 GO:0005515
Bach6g00560 600 Pfam Ubiquitin family 37 107 IPR000626 GO:0005515
Bach6g00560 600 Pfam Ubiquitin family 113 185 IPR000626 GO:0005515
Bach6g00560 600 SUPERFAMILY Protein kinase-like (PK-like) 397 591 IPR011009 -
Bach6g00560 600 SUPERFAMILY Ubiquitin-like 108 185 IPR029071 -
Bach6g00560 600 CDD Ubl_ubiquitin_like 113 182 - -
Bach6g00560 600 Pfam Phosphatidylinositol 3- and 4-kinase 291 538 IPR000403 -
Bach6g00560 600 ProSiteProfiles Ubiquitin domain profile. 54 106 IPR000626 GO:0005515
Bach6g00560 600 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 282 575 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00560 Bach-Chr6 4129522 4131636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00560 1 600 Acyl Lipid Metabolism Gene Families AT5G24240 56.033 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00560 - - qsa:O6P43_017784 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00560 6 4129522 4131636 Bach12g00973 12 6924669 6926652 ECH
Bach6g00560 6 4129522 4131636 Bach6g00560 6 4129522 4131636 ECH
Bach4g00039 4 275260 277381 Bach6g00560 6 4129522 4131636 ECH