Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00556 ATGGAAGGGAAAACAAGAAATGCTCTTCTCTTCTCCTTCTTCACCATATTCCTTTCTCTCTCTGCTGCTTTCTCCGACCCATCTCAGCTCCAAACCCAAACTCTAGTTGTACGCTCCCTCCCTCACCCTAGTACACTATCGCGGCCCGAATCCGAAGCCGTCTCCGGCGAATCCGACTCAGAATCCGAAACCACCTTGTCTTTGCAGCTACACCACATTGATGCTCTCTCGCTTAACAAAACCCCAGAGCAGCTCTTCAACCTTAGGCTCCAAAGAGATGCTGCAAGAGTGAAATCCTTCGCTTCCCTCGCAGCAACTGTTGCTTCTCTGAATCAGAGCCAAGCTCGTGGGCAGGCCGGGTCGGGTTTCAGCAGCTCAGTGATCTCGGGCCTCGCGCAGGGTAGCGGTGAGTACTTCACGCGCTTGGGTGTAGGTACGCCTGCGAGGTACGTTTACATGGTGTTAGATACTGGGAGCGACGTCGTTTGGCTCCAGTGTGCTCCTTGCCGGAAATGCTACACTCAAACCGACCCGGTTTTTGATCCGACCAAATCTCGGTCATTCGCAGGGATCCCTTGTGGGTCCCCACTCTGCCGCCGACTGGACTCTCCGGGTTGTAACCAGAAGAAGGTTTGTCAGTACCAAGTTTCTTACGGTGACGGTTCGTTCACTTTTGGTGACTTCTCCACTGAAACGCTGACGTTTCGAAGGACCAGAGTGCCGCGAGTGGCTCTTGGCTGTGGCCACGACAATGAGGGGCTCTTCGTAGGCGCCGCCGGTTTGCTCGGACTCGGTCGGGGGAAGTTATCATTTCCAACTCAAACCGGAATCCAGTTCAACCAAAAATTCTCGTATTGCTTAGTAGACCGATCCGCTTCCTCTAAGCCTTCATCCGTTGTGTTTGGTGACTCGGCCGTTTCTCGAGCCGCCCGGTTCACTCCTCTGCTCAAAAACCCTAAGCTCGATACTTTCTACTATGTTGAACTTCTTGGGATCAGTGTTGGTGGCGCTCCAGTTCGTGGCGTTTCCGCGTCGCTCTTCCGGCTCGACCCTGCCGGAAACGGTGGCGTAATAATCGACTCTGGTACGTCCGTGACTCGTCTGACCCGTACGGCCTACATTGCCCTGAGAGACGCATTCCGGGTCGGAGCCTCCCAACTGAAGCGGGCGCCTGAGTTTTCGCTTTTCGATACATGCTACGACTTGTCCGGGAAGACGGAGGTGAAGGTACCCACGGTGGTGCTACATTTCCGAGGTGCAGACGTGTCACTTCCGGCGACGAATTACTTGATTCCGGTGGATAGCAGCGGCAGCTTTTGCTTCGCGTTTGCGGGAACATTGGGTGGGTTGTCAATAATTGGCAACATCCAGCAGCAAGGGTTCCGGGTCGTATACGACCTGGCTGCCATGCGGGTCGGGTTTGCTCCGCGTGGGTGCGCGTAA 1443 0.5495 MEGKTRNALLFSFFTIFLSLSAAFSDPSQLQTQTLVVRSLPHPSTLSRPESEAVSGESDSESETTLSLQLHHIDALSLNKTPEQLFNLRLQRDAARVKSFASLAATVASLNQSQARGQAGSGFSSSVISGLAQGSGEYFTRLGVGTPARYVYMVLDTGSDVVWLQCAPCRKCYTQTDPVFDPTKSRSFAGIPCGSPLCRRLDSPGCNQKKVCQYQVSYGDGSFTFGDFSTETLTFRRTRVPRVALGCGHDNEGLFVGAAGLLGLGRGKLSFPTQTGIQFNQKFSYCLVDRSASSKPSSVVFGDSAVSRAARFTPLLKNPKLDTFYYVELLGISVGGAPVRGVSASLFRLDPAGNGGVIIDSGTSVTRLTRTAYIALRDAFRVGASQLKRAPEFSLFDTCYDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGSFCFAFAGTLGGLSIIGNIQQQGFRVVYDLAAMRVGFAPRGCA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00556 480 CDD cnd41_like 137 479 IPR033873 -
Bach6g00556 480 PANTHER ASPARTYL PROTEASES 33 473 IPR001461 GO:0004190|GO:0006508
Bach6g00556 480 ProSiteProfiles Peptidase family A1 domain profile. 138 475 IPR033121 -
Bach6g00556 480 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 357 368 IPR001969 GO:0004190|GO:0006508
Bach6g00556 480 Gene3D Acid Proteases 109 299 IPR021109 -
Bach6g00556 480 Pfam Xylanase inhibitor C-terminal 325 475 IPR032799 -
Bach6g00556 480 FunFam Aspartyl protease family protein 2 303 479 - -
Bach6g00556 480 FunFam aspartyl protease family protein 2 114 301 - -
Bach6g00556 480 SUPERFAMILY Acid proteases 131 479 IPR021109 -
Bach6g00556 480 Gene3D Acid Proteases 300 480 IPR021109 -
Bach6g00556 480 PRINTS Pepsin (A1) aspartic protease family signature 451 466 IPR001461 GO:0004190|GO:0006508
Bach6g00556 480 PRINTS Pepsin (A1) aspartic protease family signature 144 164 IPR001461 GO:0004190|GO:0006508
Bach6g00556 480 PRINTS Pepsin (A1) aspartic protease family signature 357 368 IPR001461 GO:0004190|GO:0006508
Bach6g00556 480 MobiDBLite consensus disorder prediction 41 61 - -
Bach6g00556 480 Pfam Xylanase inhibitor N-terminal 138 303 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00556 Bach-Chr6 4109987 4111429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00556 136 479 Miscellaneous Gene Families AT1G44130 29.024 7.40e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00556 K22683 - qsa:O6P43_027380 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00556 6 4109987 4111429 Bach6g00556 6 4109987 4111429 ECH