Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00399 ATGGCGGTCTCTACTATAGCTTTATACGCTAGCCCACCAAGCAGTGTGTGCTCCACGCCGCTCCCTTGCCAGATCAACGCTCATTCGTCTTACGACTTCGAATTGGGTTCTCGTTCTTCGTCCTCGTCTTCCACTACGGCATCAACATCTCAGAAGCCAGTAATGGGTGGCCTCTCGTGCCTGTTCTCTTCGCCGGTGGTGAAGCACGCACCATTATCGAGCTTCTCCTGTGCCGGAGAGGAATTGGGTTCTCTTTGGCATGATAGAGGGGATGAATTAAAGGAACTGAGTTCCTCCTTTTCCTATTCGCCAAGTAAATTTGGCGGGTCGTCTTGGAAGAGGGATCAGAGCCCGGTATCGGTTTTCCAAGCTCCCGTTTCGTGTAGCAGTAGTACTGTTGGTTCCGCAAGGAGTCAATCAGTGAGGATCGGATGCGAAAAGGGTGGGAATGTGAATTATCAGAGTTCAATTCGGGGTGGGACTGGTGGGCGGTTTGTTGGGTTTGTGAGGAATGCACTAGGGTCCTGCTTAGATTATGATTCCTCAAGTTCTGAGGTGCGTAGTGGAGACTTAGATGTGGGTTCTTCATCTGCCTTGGTGGATGAATTGACCTTCAATTTAGAAGATGCTTTTGTGGAGGGTAGTTTTGAGCCTTACGCTAGAGAATTGCTACTGAAGGCCCAGTTGAGGCACAAGATCTTTTGTGAAGAGTTCGTTATTAAGGCTTTTTATGAAGCTGAGAAAGCGCATAGAGGGCAGATGCGAGCTTCTGGCGATCCGTATTTGCAACATTGTGTGGAAACAGCAGTGCTGCTCGCTTTGATTGGTGCCAATTCTACAGTAGTTGCTGCCGGGCTTTTGCATGACACACTTGATGATTCTTTTCTGACATATGATTATATTTTTGGGGCATTTGGCGCTGGGGTTGCTGATTTAGTTGAAGGGGTGTCTAAGCTGAGCCATTTAAGCAAACTTGCGCGTGATAACAATACAGCTAGCAAGTCAGCTGAAGCAGACCGGTTGCATACCATGTTTCTTGCAATGGCAGATGCAAGAGCTGTCCTCATCAAATTGGCAGATCGATTACATAATATGATGACACTAGATGCACTGCCAGTGGCCAAGCAACAAAGGTTTGCAAAGGAGACTTTGGAGATTTTTGCACCTTTAGCCAATCGTTTGGGAATATCCACTTGGAAGGAGCAGTTGGAAAATTTATGTTTTAAGCATCTCAACCCAGACCAGCACAAAGAACTGTCTTCAAAGCTTGTGGAATTGTCTGATGATGCAATGATTAATTCTGCTAAAGAGAGATTAGAGCAAGCACTTAAAGATGAAGGCATTTCTAATGTACTCTCTGGGCGTCATAAGAGCTTGTACAGCATTTATTGCAAAATGTTGAAGAAGAAGATGACCGTGAATAACATCCATGATATTTATGGGCTGCGCTTGATTGTTGACGAGGAGGAGGACTGCTATAAAGCCTTGAGAGTTGTTCACCAGCTATGGTCTGAGGTACCTGGAAAACTGAAAGATTATATAAGCCGCCCCAAGTTCAATGGGTACAAGTCTGTGCATACTGTTGTGATGAGTGAAGGCAAGGTACCCCTTGAAGTACAAATTCGGACAAAAGAGATGCATTTGCAAGCAGAATTTGGGTTTGCTGCTCATTGGAGATACAAGGAAGGTGATTGTCAGCATTCCTCATTTGTGCTTCAGATGGTTGAGTGGGCCCGATGGGTGATGACCTGGCAGTGCGAGACAATGACCAAAGATCGTTCATCCATTAAGTACCCTGATTCAATCAAGCCGCCATGCAAGTTCCCTTCCCATGCTGATGATTGCCCATATTCTTATAGATCTCATTGTGGTGATGACATTGACAGCCCTGTGTTTGTAATCATGATCGAGAATGATAAGATGTCTGTCCAGGAGTTTGCTGCAAACTCTACAGTAATGAATTTGTTGGAAAGTGCTGGGAGAGGAAGCTCTAGATGGACTCCGTACAGGTTCCCACTGAAGGAAGAATTGAGGCCAAGGCTGAATCATGAGCCTGTAAGTGATCCCACCTGCAAGTTGAAGATGGGCGATGTGGTGGAGCTAACACCAGCGATACCTGATAAGTCTCTAACTGAGTATAGGGAAGAAATCCAGCGGATGTATGATCGTGGACCAACTGCATCAGGCAAAGTGCCTGCTGCCAGCGGCATGGCTGGCTTGAGAAGTTGA 2229 0.4625 MAVSTIALYASPPSSVCSTPLPCQINAHSSYDFELGSRSSSSSSTTASTSQKPVMGGLSCLFSSPVVKHAPLSSFSCAGEELGSLWHDRGDELKELSSSFSYSPSKFGGSSWKRDQSPVSVFQAPVSCSSSTVGSARSQSVRIGCEKGGNVNYQSSIRGGTGGRFVGFVRNALGSCLDYDSSSSEVRSGDLDVGSSSALVDELTFNLEDAFVEGSFEPYARELLLKAQLRHKIFCEEFVIKAFYEAEKAHRGQMRASGDPYLQHCVETAVLLALIGANSTVVAAGLLHDTLDDSFLTYDYIFGAFGAGVADLVEGVSKLSHLSKLARDNNTASKSAEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHKELSSKLVELSDDAMINSAKERLEQALKDEGISNVLSGRHKSLYSIYCKMLKKKMTVNNIHDIYGLRLIVDEEEDCYKALRVVHQLWSEVPGKLKDYISRPKFNGYKSVHTVVMSEGKVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVMTWQCETMTKDRSSIKYPDSIKPPCKFPSHADDCPYSYRSHCGDDIDSPVFVIMIENDKMSVQEFAANSTVMNLLESAGRGSSRWTPYRFPLKEELRPRLNHEPVSDPTCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGPTASGKVPAASGMAGLRS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00399 742 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 126 708 - -
Bach6g00399 742 Pfam HD domain 244 396 - -
Bach6g00399 742 Pfam Region found in RelA / SpoT proteins 454 563 IPR007685 GO:0015969
Bach6g00399 742 SUPERFAMILY Nucleotidyltransferase 402 594 IPR043519 -
Bach6g00399 742 Gene3D Hypothetical protein af1432 221 412 - -
Bach6g00399 742 Gene3D Beta Polymerase, domain 2 416 544 IPR043519 -
Bach6g00399 742 ProSiteProfiles HD domain profile. 261 365 IPR006674 -
Bach6g00399 742 CDD NT_Rel-Spo_like 433 552 IPR007685 GO:0015969
Bach6g00399 742 SMART RelA_SpoT_2 454 564 IPR007685 GO:0015969
Bach6g00399 742 ProSiteProfiles S4 RNA-binding domain profile. 680 716 - -
Bach6g00399 742 SUPERFAMILY HD-domain/PDEase-like 221 412 - -
Bach6g00399 742 FunFam GTP pyrophosphokinase RelA 222 412 - -
Bach6g00399 742 FunFam GTP pyrophosphokinase RelA 413 544 - -
Bach6g00399 742 MobiDBLite consensus disorder prediction 722 742 - -
Bach6g00399 742 SMART hd_13 257 374 IPR003607 -
Bach6g00399 742 CDD HDc 259 387 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00399 Bach-Chr6 2833541 2836922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00399 262 563 EF-hand Containing Proteins AT3G17470 31.902 1.25e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00399 K00951 - qsa:O6P43_018406 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00399 6 2833541 2836922 Bach6g00399 6 2833541 2836922 ECH