Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00338 ATGTATCGAATAGCATCGAAATTAGCTTCGTCGATCAGTTCCTCTACATCGAAGAAACTCGTATGTAGTCGGATTATATCAAGCAGAAATTATGTAGCTAAAGATATCAATTTCGGAGTTGGGGCTCGTGCTGCCATGCTGCAGGGGGTATCTGATGTTGCTGAGGCTGTAAAAGTAACAATGGGACCCAAGGGCCGCAATGTAATTATTGAGAAAAGTCGTGGGAATCCCAAGGTTACAAAGGATGGTGTCACTGTAGCCAAAAGTATCAACTTCAAGGACAAGGCCAAAAATGTTGGTGCAGATCTTGTAAAGCAGGTGGCCAAGGCTACCAACACTACCTGCGGGAGATGTTCTCCATTATCATGCTCCTGGTTTACCTGTCCCCAACAGGGTAAAAATGAAGTTCGGGTAACTGGTACAACTTGTGCAACGGTTCTGACTCAGGCAATACTTATAGAAGGTTGCAAATCAATCGCTGCTGGTGTAAATGTCATGGATTTGCGTAATGGTATAAATAAGGCTGTTGATGCCATAATTACTGATTTGAAAAGCAGAGCAACAATGATAAGCACACCAGAAGAGATAACACAGGTTGGAACTATATCTGCAAATGGGGAGCGTGACATTGGAGAACTGTTAGCAAGAGCAATGGAGAAAGTTGGGAAGGCAGGCGTTATTACTGTTGCTGATGGAAATACTTTGGATAATGAGTTGGAAGTTGTAGAAGGAATGAAGCTAGCCAGAGGATACATCTCTCCTTATTTTGTTACAGATCAGAAGACCCAGAAATGTGAAATGGAGAACCCCTTTATCCTCATCCATGACAAGAAAATTTCGGACATGAATTCACTGGTGAAAATATTGGAGCTTGCAGTACAGAGAAAAAGACCACTTCTTGTTGTTGCTGAAGATGTTGAGAGTGATGCACTGGCTTTGCTCATACTCAACAAGCATCATAATGGACTGAAGGTTTGTGCTGTAAAAGCTCCAGGATTTGGGGAAAATAGAAGAGCAAATTTAGATGATCTTGCCATTCTTACTGGAGGAGAGGTTATCACAGAAGAACGTGGTTTGACACTTGACAAAGTCCAACCTGAATTTCTTGGTTCTGCAAAAAAGGTTACTATCTGCCTTGATGACACTATCATTCTACATGGTGGTGGGGATAAGAAGCTCATTGAAGAGAGATGTGAAGAGCTCAGGACAGCAATTGAGAACAGCACTGCAATGTTTGACAAGGAGAAAGCACAGGAACGACTATCAAAGTTATCTGGTGGTGTAGCTGTTTTCAAGGTTGGAGGGGCTAGTGAGGCAGAAGTTGGGGAAAGGAAAGACAGGGTGACAGATGCTTTAAATGCTACTAGAGCAGCTGTGGAGGAGGGAATTGTGCCAGGTGGTGGAGTTGCTCTCCTTTACGCTACCAAAGGCTTGGAAAACCTTCAAACTCAAAACGAGGATGAGAAAAGAGGAGTACAGATTATCCAGAATGCACTGAAGGCACCTACATTCACAATAGTTTCAAATGCTGGTTTTGATGGCGCTCTGGTTATTGGCAAATTGTTGGAACAAGACAATCATAATTTGGGTTTTGATGCGGCCGGAGGTGATTATGTTGATTTGGTGAAGGCTGGAATTATAGATCCTCTTAAAGTTATTAGAACGGCATTGGAACGCGCTGCCAGTGTCTCGTTGCTGCTGTCGACAACTGAAGCAGCTGTAGTGGAAGATCCAAATGACAAAAACAAACCTCCTAGCAGGATGCCAGATTTGGACGACTAATCTGCTTCAAAATACGGAAACCAATTTTGTGCATCAGTATTTGAGCCCTTGCGCACTTCAATTTTAGGGAGTTGGGGAGGTATTATCGAAAGTTGATTCAAAATCTTTGCTAAAAATCAGTTATTCCATTGATCTATATCTATGTACAATATTTATATAACTAAAATCTCACTCAATTTTTATTAAGTATCATTAAACCAGTTTGTGGATGATTT 1997 0.4176 MYRIASKLASSISSSTSKKLVCSRIISSRNYVAKDINFGVGARAAMLQGVSDVAEAVKVTMGPKGRNVIIEKSRGNPKVTKDGVTVAKSINFKDKAKNVGADLVKQVAKATNTTCGRCSPLSCSWFTCPQQGKNEVRVTGTTCATVLTQAILIEGCKSIAAGVNVMDLRNGINKAVDAIITDLKSRATMISTPEEITQVGTISANGERDIGELLARAMEKVGKAGVITVADGNTLDNELEVVEGMKLARGYISPYFVTDQKTQKCEMENPFILIHDKKISDMNSLVKILELAVQRKRPLLVVAEDVESDALALLILNKHHNGLKVCAVKAPGFGENRRANLDDLAILTGGEVITEERGLTLDKVQPEFLGSAKKVTICLDDTIILHGGGDKKLIEERCEELRTAIENSTAMFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYATKGLENLQTQNEDEKRGVQIIQNALKAPTFTIVSNAGFDGALVIGKLLEQDNHNLGFDAAGGDYVDLVKAGIIDPLKVIRTALERAASVSLLLSTTEAAVVEDPNDKNKPPSRMPDLDD 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00338 593 ProSitePatterns Chaperonins cpn60 signature. 457 468 IPR018370 GO:0005524|GO:0006457
Bach6g00338 593 FunFam 60 kDa chaperonin 244 425 - -
Bach6g00338 593 Gene3D - 31 121 IPR027413 -
Bach6g00338 593 Coils Coil 391 411 - -
Bach6g00338 593 Gene3D - 139 575 IPR027413 -
Bach6g00338 593 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 133 587 IPR001844 GO:0042026|GO:0140662
Bach6g00338 593 Coils Coil 478 498 - -
Bach6g00338 593 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Bach6g00338 593 PRINTS 60kDa chaperonin signature 402 427 IPR001844 GO:0042026|GO:0140662
Bach6g00338 593 PRINTS 60kDa chaperonin signature 320 343 IPR001844 GO:0042026|GO:0140662
Bach6g00338 593 PRINTS 60kDa chaperonin signature 450 471 IPR001844 GO:0042026|GO:0140662
Bach6g00338 593 Gene3D GroEL 244 425 IPR027409 -
Bach6g00338 593 Gene3D - 189 462 IPR027410 -
Bach6g00338 593 Pfam TCP-1/cpn60 chaperonin family 53 116 IPR002423 GO:0005524
Bach6g00338 593 Pfam TCP-1/cpn60 chaperonin family 140 575 IPR002423 GO:0005524
Bach6g00338 593 SUPERFAMILY GroEL apical domain-like 236 428 IPR027409 -
Bach6g00338 593 SUPERFAMILY GroEL equatorial domain-like 37 574 IPR027413 -
Bach6g00338 593 CDD GroEL 34 576 IPR001844 GO:0042026|GO:0140662
Bach6g00338 593 SUPERFAMILY GroEL-intermediate domain like 190 257 IPR027410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00338 Bach-Chr6 2408009 2415217 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00338 K04077 - gmx:100778935 934.095