Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01085 CTATGTCGAGAAATTTCGACATAAAAGAACAGCTGCCTTGCTCGAAACGACGAGTTTAAATTGACTCTTACGCAGTTACGCCCTTTTCCTCATCATTGAAACTTCCTTCGACTCAGAACCGTGTCCTTGTGCTGGTTTCACCCGGAGAGAGATAGAGAAATAGAAAGGACGTTGTGCTGCTGGCGGGAACTTCAATTGGAACTCTGTGGCACTGGCATTCCTCTCCGGAGAAGATGAAGATCAACGTTAACACGATCGCTCGCAAAGTCGAGGTTGATAATCGTATTCCCCTCCGTTATTACTTCCGGATTGCCGATAACCTCCTCAAACAGGCAAATGTCTACCGAGAGGAGAATAATGTCATTGACTTGTATATCATACTTCTTAGATTTTCAAGTTTGATTTCTGAAACTATACCTTATCATCGAGACTACCAAGTATCACTTCCTAAAGAAAGAGCAGCATATAAGAAGAGGTTGCTAGTTGTATTGGATGAGCTTGAATCCTTGCAACCAGAATTCAAACGCCGGGTGGATGAATTGAATGACTTTCATGGTAGAGCTCAGTTGCCCGAGGATAATGATTCCAGTAAGGCTTTGCCCAGTTCAGTGACTTCATCTTTGGAATGGCCTGCTGTCAATAAAAGTTCTTCCTTGAACACAGATTTTAAACAGCTGCATTCTGCTGGACTGGGTCCACAGTCTTCATGGAAGTATAATAATAGTGCTCATACTTCATATTCCATGCCAATTGACAAGCAATTTCAGAAACTATCTATTAGTATGCCGCTTCCAAAGAAGGAGACCTTATCCAGACACTCAATTTTAGGACCAAATGGTCTTCGGGGCCAGTGGCTTGCACCAAGTGCAGAAATAAAGGTTCAGTATCCAAGCAGTAGTGATTTGACAACCATTGGGGATTCCAGGCTGAATCCAGCTGAGCAATATGATATTGTGGCTGTTAAAGATGCCAACACAGGAGCAGTCCCATCCACAATGGAGTCAGTTCTCTCCTTGGATGATGGAAGATGGTCTCGTCCTGCTGAGGAGTCCTGTTCTCTTGCATTAAATGAGTCAAGGGAGGATCCCCTCCCATTGCTCAACATTAAGCAACCTTCTCCTCCTCCTGTTCTTGCTCGGATGCATCAGGAGTATGCTCCAATTCCTCCTTCAAAAGTTGCTGATCCCAGACCAGGGCCAGCTAAATCTTCTCAGGATTCTGCAATGGGTCCTTCTACATATCAACACCTACACGTTCCTGTCAAAATGATGGATGAATTTTTGAGATTGGCTCTGGAAAATACCCGGAAGAACTTGGAAACATGTGGTGTTCTTGCAGGGTCCTTGAAAAACAGGATTTTCCAAATTACTACACTTATAATTCCAAAGCAGGAGTCAACTTCTGACTCGTGTCAAACATTGAATGAAGAAGAAATATTCGAAGTTCAAGATGATTTATCTCTTTTTACTCTAGGCTGGATTCATACGCACCCATCTCAGACTTGTTTCATGTCATCTGTCGATTTACACACACATTACTCATACCAGATCATGTTACCAGAGGCGATTGCAATTGTCATGGCCCCTACAGATACAACTAGCCCACATGGCATATTCCATCTCTCTGACCCAGGTGGTGTATCTGTAATCCGTGATTGTCAACAAAGTGGATTTCACCCCCATGAGGAATCTTCTGACGGAAGCCCCATATATGAGCACTGTTCTCATGTCTATATGAACGCTAACTTAAAGTTTGAGGTGGTTGACCTTCGACAGCGATGATTTCTCACGACGACTCTGAAGAACAACACCTTCATCTACTGAGAAAAAATGGGTACATGTTCGTATCTGACCGACCGCAGGTTTAATATTGAACTGTTTCAAGGTTTATTATTCTTTTGTATTTACAAACAGATAGAGAATGAATAGCCGTCTCCATTATCCAACCTTGAGGATTTTGTATCATACCCTGAAACCTGGAGTAGAAAGATAACTTGTGTAAATATTGCGAGACTTGAGTGACAGGTATAGATGAGAAATACAGCAGTTTCACACGGTCCGATATTGTCATCGTTTTTCTTTAATTATAATTATTCGTATTGTTTGGCAAAA 2111 0.4225 MKINVNTIARKVEVDNRIPLRYYFRIADNLLKQANVYREENNVIDLYIILLRFSSLISETIPYHRDYQVSLPKERAAYKKRLLVVLDELESLQPEFKRRVDELNDFHGRAQLPEDNDSSKALPSSVTSSLEWPAVNKSSSLNTDFKQLHSAGLGPQSSWKYNNSAHTSYSMPIDKQFQKLSISMPLPKKETLSRHSILGPNGLRGQWLAPSAEIKVQYPSSSDLTTIGDSRLNPAEQYDIVAVKDANTGAVPSTMESVLSLDDGRWSRPAEESCSLALNESREDPLPLLNIKQPSPPPVLARMHQEYAPIPPSKVADPRPGPAKSSQDSAMGPSTYQHLHVPVKMMDEFLRLALENTRKNLETCGVLAGSLKNRIFQITTLIIPKQESTSDSCQTLNEEEIFEVQDDLSLFTLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRDCQQSGFHPHEESSDGSPIYEHCSHVYMNANLKFEVVDLRQR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01085 515 SUPERFAMILY USP8 N-terminal domain-like 8 115 - -
Bach5g01085 515 SUPERFAMILY JAB1/MPN domain 338 469 - -
Bach5g01085 515 PANTHER AMSH-LIKE PROTEASE 3 513 - -
Bach5g01085 515 SMART pad1_6 338 466 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bach5g01085 515 FunFam AMSH-like ubiquitin thioesterase 3 1 116 - -
Bach5g01085 515 Gene3D Cytidine Deaminase, domain 2 322 515 - -
Bach5g01085 515 Pfam USP8 dimerisation domain 7 99 IPR015063 -
Bach5g01085 515 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 335 442 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bach5g01085 515 CDD MPN_AMSH_like 336 513 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Bach5g01085 515 Gene3D - 3 122 - -
Bach5g01085 515 ProSiteProfiles MPN domain profile. 339 469 IPR037518 -
Bach5g01085 515 MobiDBLite consensus disorder prediction 310 334 - -
Bach5g01085 515 FunFam AMSH-like ubiquitin thioesterase 3 324 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01085 Bach-Chr5 7714493 7720565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01085 K11866 - gmx:100812784 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01085 5 7714493 7720565 Bach5g01085 5 7714493 7720565 ECH