Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01056 ATGTGTCCCTCTGGTCGGAGCCCCGGTCCTAAGAGTGTCTCCTTGGCCGCCAACTCATCCTTCCGAGCAGCGTTCGACGTTCTCGACGTTGATCGCGACGGAAAAATAAGCCGCAACGATCTCTGCTCGTTTTACTCTGGGTTTGTCAGCGACATCGCCGGCAACGAGGACGTAATCGGGACAATGATGACGGTGGCGGACACCAACAAAAACGGGTTCGTGGAATACGACGAGTTCGAGCGCGTGCTTCTCGGAAATTTCCAGAAAAGACCGTTGGTCTCTACGGTTATGGAGGATGTATTCAGAATGATGGACAAGGACGGAGACGGCAAGCTTAGCCACAATGATTTGAAGAGCTACATGGCTTGGGCTGGCTTCGATGCCACGGACGAAGATATCAATGCTATGATTAAATTAGGAGGTGGTGATCAAAACGGCGGCGTCAGCTTCGATGGCTTGCTTCGAATATTGGCCGTTGATAATGTCGTGTAA 492 0.5163 MCPSGRSPGPKSVSLAANSSFRAAFDVLDVDRDGKISRNDLCSFYSGFVSDIAGNEDVIGTMMTVADTNKNGFVEYDEFERVLLGNFQKRPLVSTVMEDVFRMMDKDGDGKLSHNDLKSYMAWAGFDATDEDINAMIKLGGGDQNGGVSFDGLLRILAVDNVV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01056 163 ProSiteProfiles EF-hand calcium-binding domain profile. 54 89 IPR002048 GO:0005509
Bach5g01056 163 ProSiteProfiles EF-hand calcium-binding domain profile. 92 127 IPR002048 GO:0005509
Bach5g01056 163 ProSiteProfiles EF-hand calcium-binding domain profile. 16 51 IPR002048 GO:0005509
Bach5g01056 163 ProSitePatterns EF-hand calcium-binding domain. 105 117 IPR018247 -
Bach5g01056 163 ProSitePatterns EF-hand calcium-binding domain. 29 41 IPR018247 -
Bach5g01056 163 Pfam EF hand 97 121 IPR002048 GO:0005509
Bach5g01056 163 FunFam Calmodulin-2 A 14 160 - -
Bach5g01056 163 CDD EFh 98 158 IPR002048 GO:0005509
Bach5g01056 163 Gene3D - 7 162 - -
Bach5g01056 163 PANTHER CALCIUM BINDING PROTEIN 97 154 - -
Bach5g01056 163 SMART efh_1 96 124 IPR002048 GO:0005509
Bach5g01056 163 SMART efh_1 132 160 IPR002048 GO:0005509
Bach5g01056 163 SMART efh_1 20 48 IPR002048 GO:0005509
Bach5g01056 163 SMART efh_1 58 86 IPR002048 GO:0005509
Bach5g01056 163 Pfam EF-hand domain pair 22 81 IPR002048 GO:0005509
Bach5g01056 163 ProSitePatterns EF-hand calcium-binding domain. 67 79 IPR018247 -
Bach5g01056 163 SUPERFAMILY EF-hand 20 157 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01056 Bach-Chr5 7477864 7478355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01056 1 159 EF-hand Containing Proteins AT5G49480 52.410 1.86e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01056 K02183 - qsa:O6P43_021875 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01056 5 7477864 7478355 Bach5g01056 5 7477864 7478355 ECH