Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00917 ATGATCCTCCCCATAATCTTCATCTTTTCTCTCCTTCACTCCTCCCATGCCTTGGTGCAAGATTTCTGTGTTGCAGATTATACAGCTCCAGTTGGCCCTGCGGGATACTCTTGCAAGAAGCCTGCAAAGGTCACTGCAGATGATTTTGCTTTCTCTGGCCTAGGCATTCCTGGTAACACCTCAAATATCATCAAAGCTGCTGTGACCCCTGCATTTGATGCTCAGTTACCTGGTCTGAATGGCCTTGGCATTTCTGCGGCTCGTTTAGACTTCGCAGTTGGAGGAGTTATACCATTGCATACACATCCTGCAGCTTCAGAACTCCTTACTGTCGTGCAAGGGACAATTTGTACTGGATTCATTTCATCTGACAACACCGTCTACCTAAAAACTCTCGAAAGGGGGGACATTATGGTATACCCACAAGGTTTATTGCACTTCCAAATCAATGCAGGAGCTGTTCCAGCCCTAGCATATGTAACCTTCAGTAGTCCAAACCCTGGTCTACAAATTCTGGACTTTGCATTGTTCAAAAGTTCTTTCCCAACTGAGTTGATAAAGCAAACCACTTTCCTTGACGAAGCTCAGATTAAGAAGCTCAAGGCTGTTCTTGGAGGAACAGGTTAA 627 0.453 MILPIIFIFSLLHSSHALVQDFCVADYTAPVGPAGYSCKKPAKVTADDFAFSGLGIPGNTSNIIKAAVTPAFDAQLPGLNGLGISAARLDFAVGGVIPLHTHPAASELLTVVQGTICTGFISSDNTVYLKTLERGDIMVYPQGLLHFQINAGAVPALAYVTFSSPNPGLQILDFALFKSSFPTELIKQTTFLDEAQIKKLKAVLGGTG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00917 208 CDD cupin_OxOx 15 204 IPR001929 GO:0030145
Bach5g00917 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 13 201 - -
Bach5g00917 208 Gene3D Jelly Rolls 14 207 IPR014710 -
Bach5g00917 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Bach5g00917 208 PRINTS Germin signature 100 120 IPR001929 GO:0030145
Bach5g00917 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Bach5g00917 208 ProSitePatterns Germin family signature. 95 108 IPR019780 GO:0030145
Bach5g00917 208 FunFam Auxin-binding protein ABP19a 16 207 - -
Bach5g00917 208 SUPERFAMILY RmlC-like cupins 17 201 IPR011051 -
Bach5g00917 208 SMART Cupin_1_3 52 198 IPR006045 -
Bach5g00917 208 Pfam Cupin 53 197 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00917 Bach-Chr5 6490851 6491477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00917 1 207 Miscellaneous Gene Families AT5G20630 67.788 2.14e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00917 - - gmx:100806553 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00917 5 6490851 6491477 Bach2g01449 2 23565965 23566591 BWGD