Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00478 ATGAGGTGGGAAAAGGTTCAGGTAAATCCCATTCAGGCTCAAGGAGTAGCTCAACAAGGAGTGGTTAAGCTATCTGGGCCAGGCAAGAGGTGGGGACATTCCTGCAACGCCATTAAAGGTGGGAGACTTCTCTATGTCTTCGGGGGTTACGGCAAAGATAACTGCCAGACAAACCAAGTTCACGTCTTTGACACTGTCAAACAAACTTGGATCCTACCCGTGATTAAAGGCACTCCTCCAACTCCTAGGGACAGCCATAGCTGCACGACTGTTGGTGATAATCTATTTGTCTTTGGGGGGACAGATGGGATGAACCCACTCAAAGACTTGCACATACTAGACACTTCTACACATACATGGATTTCTCCTACTATAAGAGGAGAAGGACCAGAGGCACGGGAGGGCCATAGTTCAGCCCTTGTTGGTAAACGGCTATTCATATTTGGTGGTTGTGGAAAATCTGCAGATAACAATAATGAGGTTTACTACAATGATCTTTACATATTGAATACAGAGACTTTTGTTTGGAAGTGTGCAGCTACATCTGGCAATCCCCCATCTCCTCGTGATAGCCATACTTGTTCCTCTTGGAAAAACAAAGTTATTGTGATAGGTGGTGAAGATGGACATGATTATTACTTGTCTGATGTCCATATCCTTGATACAGATACTCTAATTTGGAGGGAGCTGAATGTATCTGGCCAGTTATTGCCACCTCGAGCTGGTCATTCTACCGTTTCTTTTGGCAGGAACTTGTTTGTTTTTGGAGGCTTTACAGATGCCCAAAATTTATACAACGACCTTTATATGCTTGATGTTGATACTGGTATTTGGACTAAGGTGGCAACTGCAGGCGATGGACCTTCTGCTAGATTTTCTGTTGCTGGCGACTGTTTAGACCCGTTTAAGGGTGGTGTTCTTGTTTTCTATGGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGACATGTTTTACCTCTATACAGGTCTTGCTCGGGAAACTGAACAGAGGCCAGAGAAGTTATCTTTAAGGAAGCAATTGAAGCTGAAATGCCAAGAACAAAATCTCAATACTGTACAAGACCAAGGTCTGTTCAGATATCGAGTAGGTGCTGACGTTAGCCAGCACATGACAGTGTTGGGTTATAGCCAGCCAAGTAGACAAAATATCCCAGTGCATCAATCCATGCCTCCTGGAAAGAAATCATTTCAAGCGAAGGTTACTGAAAGCATCTCAGAAGGATATAGTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGAATTCTGTTTTTAAACAAGCCAAACTCTCTGCACCCAGCTACTCTTACTTCCAGTAGGAAAAGGATTGCTGCTGAAACTGGTATTGTTATCCCGATTGGTATGCATCCCAACAAATTAAAGAATTCTAAAGCGCTTAAGCAGGATGAAATAGAAGACAGACAGATAGATGGTGTTCAGAAAGACAGTTCAGCATCTAACGAGAACCTTACGAAAGCTTTTGCCACACTGCTATCAAGCAACCCTACTTCTGATGCTTCCAAATCCCTTAAGGTTTCTGTCAACCAAGAACCAGAAGCTGTTTCTTTGAATCAGGACTGTGATAAGAAAAATGACATGCCAAGTTCCAAAACTGACGTCCCAACTGATGATAAAACAATTAATGTGCCAGGTTCCAAAACTGATGTCCTTACTGATGGTAAAACATGTGATGTTCCAAGTTCTAGTGCCGGTGTCCCGATGGATGATAAAACAAATGATGCACCAGTTTCCAAAACTGATGATATGACCAATGATGTTGTGCCAAGTTCTGACGTTAGTGTCCCTACTGATGATAAAACAAATGATGCACCTGTTTCCGAGACTTCTGCCTCTGCTGGTAATAGAATTAATGATGCGCCAGTTTCCAATTCTGAAGTCCCGAGACAAGATCAAACAAGTGATGAACCAATCTTCAACACTGAAGTTCTGAAACCTGCTGCAGTTGAGAGCCTTCTGTCTCTGTCAAATCAAGATTGCACAGGTCCAAGGACAGAAGAAAACAATGAACCTGTGAAATGA 2061 0.427 MRWEKVQVNPIQAQGVAQQGVVKLSGPGKRWGHSCNAIKGGRLLYVFGGYGKDNCQTNQVHVFDTVKQTWILPVIKGTPPTPRDSHSCTTVGDNLFVFGGTDGMNPLKDLHILDTSTHTWISPTIRGEGPEAREGHSSALVGKRLFIFGGCGKSADNNNEVYYNDLYILNTETFVWKCAATSGNPPSPRDSHTCSSWKNKVIVIGGEDGHDYYLSDVHILDTDTLIWRELNVSGQLLPPRAGHSTVSFGRNLFVFGGFTDAQNLYNDLYMLDVDTGIWTKVATAGDGPSARFSVAGDCLDPFKGGVLVFYGGCNKSLEALDDMFYLYTGLARETEQRPEKLSLRKQLKLKCQEQNLNTVQDQGLFRYRVGADVSQHMTVLGYSQPSRQNIPVHQSMPPGKKSFQAKVTESISEGYSIETVIDGKPLRGILFLNKPNSLHPATLTSSRKRIAAETGIVIPIGMHPNKLKNSKALKQDEIEDRQIDGVQKDSSASNENLTKAFATLLSSNPTSDASKSLKVSVNQEPEAVSLNQDCDKKNDMPSSKTDVPTDDKTINVPGSKTDVLTDGKTCDVPSSSAGVPMDDKTNDAPVSKTDDMTNDVVPSSDVSVPTDDKTNDAPVSETSASAGNRINDAPVSNSEVPRQDQTSDEPIFNTEVLKPAAVESLLSLSNQDCTGPRTEENNEPVK 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00478 686 Pfam Galactose oxidase, central domain 239 288 - -
Bach5g00478 686 Pfam Galactose oxidase, central domain 30 70 - -
Bach5g00478 686 Pfam Galactose oxidase, central domain 188 235 - -
Bach5g00478 686 MobiDBLite consensus disorder prediction 508 652 - -
Bach5g00478 686 MobiDBLite consensus disorder prediction 508 529 - -
Bach5g00478 686 PANTHER KELCH REPEAT DOMAIN 3 522 - -
Bach5g00478 686 Pfam Kelch motif 82 120 IPR006652 GO:0005515
Bach5g00478 686 MobiDBLite consensus disorder prediction 667 686 - -
Bach5g00478 686 SMART kelc_smart 43 93 IPR006652 GO:0005515
Bach5g00478 686 SMART kelc_smart 200 250 IPR006652 GO:0005515
Bach5g00478 686 SMART kelc_smart 94 143 IPR006652 GO:0005515
Bach5g00478 686 SMART kelc_smart 251 301 IPR006652 GO:0005515
Bach5g00478 686 MobiDBLite consensus disorder prediction 591 652 - -
Bach5g00478 686 Pfam Kelch motif 130 174 - -
Bach5g00478 686 MobiDBLite consensus disorder prediction 530 546 - -
Bach5g00478 686 Gene3D - 156 403 IPR015915 GO:0005515
Bach5g00478 686 Gene3D - 2 153 IPR015915 GO:0005515
Bach5g00478 686 SUPERFAMILY Galactose oxidase, central domain 212 315 IPR011043 -
Bach5g00478 686 MobiDBLite consensus disorder prediction 547 572 - -
Bach5g00478 686 SUPERFAMILY Galactose oxidase, central domain 23 231 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00478 Bach-Chr5 3265531 3271234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00478 57 316 Acyl Lipid Metabolism Gene Families AT3G05420 29.151 1.58e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00478 - - gmx:100820222 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00478 5 3265531 3271234 Bach5g00478 5 3265531 3271234 ECH