Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00473 ATGAAGACGAGGAAATGGTCAAGCTCTCTTATCGCTGCTTGCTTACACAACTGGGAGATCTCTTTTGTTCCTCTTTCTCTCGACTTCAAAATCGTCTCCAAGCAGATGGCAATGCAGGAAGCGAGCCCTGCCCCAGCTCCCAGTGCTCAAGTTGTTGGCAATGCCTTTGTGGAGCAATATTACCACATTTTACACCAATCCCCAAATTTGGTGCATAGGTTTTATCATGATTCAAGTTTCCTAAGTCGAGCAGATGGCAATGGTGTGATGACAACAGTGACAACTTTGCAGGCAATTAATGAAAAGATTCTTTCCCTGAACTATGAAGACTATACTGCAGAAATAAAGAGTGCAGATGCTCAGGAGTCACATGGAAAGGGTGTGATAGTTTTAGTAACCGGAAGCTTAACTGGGAAGGATGATGTGAGAAGGAAGTTCTCGCAGATATTCTTTCTAGCTCCACAAGATAAAGGTTACTTTGTCTTAAATGACGTCTTTAGGTTTGTTGAGGAGAGCAACACATCACAGTTAAATTCTGTCCCAGTTAATGTCATCAATGAAAATGCTGAGGCAACTCCCATGCCAGAAACAGAGGTCATACATCCTCCTGAACATTGTGTGGCAGACTCCGCAACCTCTGCAGAGGGAGAACACCTTAATAATGGTGCTGAAGATTGTGATCCTTTAGACAACGAGGAAGAAGGATCAGTTATTGATGAAGAAGTTGTGGAACCTAGTACTGATTTAAGTCAGAGCAATATCATTGCAAGTGATGATTCAATTCCAGCAGCCCAGGATGATGCACCAAGGAAATCATATGCGTCAATTGTAATGAAAAGTAATGCTGCCTCTGGTCCTGTCAATGTTCCCATCAGAACTGCAAAAGTAACATCTGCAAAAATTGTTCAACAGTTTCCTCCTACTGCCAAATCTACTTCTGCACCTGAGGCAGTATCTTCTAGTACTGACAATGTTCCTGAGAGTAGTGATATTCATGAAGAAGCTGAAGGTCACTCCATATACGTGCGGAATTTGCCTTTTGATGCAACAGTTGAACAGCTGGAGGAAGTGTTTAAGAAATTTGGTTCTATTAAGCATGATGGAATCCAAGTTAGAAGTAGTAAGCAGGGATTCTGTTTTGGCTTTGTTGAATTTGAAGAGTTGAGTTCCATGCACAGTGCACTTGAGGCTTCACCTATCACAGTTGAAGATCGACTAGCTGTAATTGAGGAAAAGAGAACCACTACTCGAGTTACCGGCAGTGGAAGAGGGAGGTATCCTTCAGGAAGAAGTGGGTTCCGAAATGAAAGTTTCAGAAACCGTGGGAAATATGGTGGTGGGCGTGGATATGGTAGAAATGAATTTAGAAGCCAAGGGGAGTTTTCAGGACGACCAAAGGGTTCAGCAGGACAGAAAGGAGATAATTCTCAACGGGTAAGTCAGAATGGAGGTGGACGATACGGGCGTCAAGGTGGGGCAAGCCGTAGTTCTATACCTTCAACTTCAGCATAAACATTGGTGAAAAGAAACTGGTGAATGGACAATTTTTTACAGGAAAAGCAAGCCAATCACTTTTTTCTTTTCCGCTTGTTGAGGAAGGGAAAAAAA 1608 0.4272 MKTRKWSSSLIAACLHNWEISFVPLSLDFKIVSKQMAMQEASPAPAPSAQVVGNAFVEQYYHILHQSPNLVHRFYHDSSFLSRADGNGVMTTVTTLQAINEKILSLNYEDYTAEIKSADAQESHGKGVIVLVTGSLTGKDDVRRKFSQIFFLAPQDKGYFVLNDVFRFVEESNTSQLNSVPVNVINENAEATPMPETEVIHPPEHCVADSATSAEGEHLNNGAEDCDPLDNEEEGSVIDEEVVEPSTDLSQSNIIASDDSIPAAQDDAPRKSYASIVMKSNAASGPVNVPIRTAKVTSAKIVQQFPPTAKSTSAPEAVSSSTDNVPESSDIHEEAEGHSIYVRNLPFDATVEQLEEVFKKFGSIKHDGIQVRSSKQGFCFGFVEFEELSSMHSALEASPITVEDRLAVIEEKRTTTRVTGSGRGRYPSGRSGFRNESFRNRGKYGGGRGYGRNEFRSQGEFSGRPKGSAGQKGDNSQRVSQNGGGRYGRQGGASRSSIPSTSA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00473 503 MobiDBLite consensus disorder prediction 243 267 - -
Bach5g00473 503 MobiDBLite consensus disorder prediction 469 484 - -
Bach5g00473 503 CDD NTF2 48 170 IPR018222 -
Bach5g00473 503 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 338 414 IPR000504 GO:0003723
Bach5g00473 503 FunFam Nuclear transport factor 2 family protein 43 172 - -
Bach5g00473 503 SUPERFAMILY RNA-binding domain, RBD 335 445 IPR035979 GO:0003676
Bach5g00473 503 FunFam Ras GTPase-activating protein-binding protein 1 326 453 - -
Bach5g00473 503 MobiDBLite consensus disorder prediction 306 326 - -
Bach5g00473 503 MobiDBLite consensus disorder prediction 245 259 - -
Bach5g00473 503 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 340 397 IPR000504 GO:0003723
Bach5g00473 503 SUPERFAMILY NTF2-like 48 169 IPR032710 -
Bach5g00473 503 SMART rrm1_1 339 410 IPR000504 GO:0003723
Bach5g00473 503 ProSiteProfiles Nuclear transport factor 2 domain profile. 52 168 IPR018222 -
Bach5g00473 503 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 48 471 IPR039539 -
Bach5g00473 503 CDD RRM_SF 340 403 - -
Bach5g00473 503 Gene3D - 42 172 - -
Bach5g00473 503 MobiDBLite consensus disorder prediction 415 503 - -
Bach5g00473 503 Gene3D - 310 460 IPR012677 -
Bach5g00473 503 Pfam Nuclear transport factor 2 (NTF2) domain 52 168 IPR002075 -
Bach5g00473 503 MobiDBLite consensus disorder prediction 306 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00473 Bach-Chr5 3229346 3234463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00473 K24983 - gmx:100801253 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00473 5 3229346 3234463 Bach5g00473 5 3229346 3234463 ECH