Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00468 ATGCCTCACTCTAATCAGCCACAACACTGCAGAGAAGCTGAACCCTTTCAATCTTTGACCTTTCCAATGTCTCAGAACCAAAGACCCCCGACCATTCTTGACTCTCTCGGGGAAGAAATTGTTAGAATCATTGTACCGGTATCAATCTGCATGTTTTTGGTGGTCATCTTGGTCTCAATCCTCAATTCCAACTCTTCTTCAGTGTCAATCACCAGTATAGCCACTATAGCTTATAGTGAGACAAATTCAGATTCTTCCTGGGACAAATTCGTAGGTGCCCTTTTGAACTCATTGGCATTTGTTGTTGTTGTTACTATTGTGACATTTGTTTTGGTCCTTCTCTTCTATTTCAGATGCACCAAGTTCTTAAAGCTCTATATGGGTTTCTCTGCTTTTGTTGTTTTGGGGTTCTTGGGTGGGGAAATTGCATTATTCTTAATTGAAGACTTTAGTATTCCTATTGATTGCATAACATTCCTCCTGGTTTTATTTAATTTTTCTGTTGTTGGTGTACTGGCTGTCTTTATGTCCAAAATGGCAATTCTTGTTACACAAGCGTACTTGGTTCTTATTGGAATGTTGGTCGCTTATTGGTTTACTATGTTACCTGAATGGACCACCTGGGTGCTGTTGGTTGCCATGGCATTATATGATCTTGCTGCAGTTTTATTACCTATTGGCCCGTTAAGGCTTTTGGTAGAGCTTGCAATAGCAAGAGATGAAGAAATACCAGCATTGGTTTATGAAGCTAGGCCAGTGAACTATGAGAACTCTGATCCAAGGGGTGGTGTAGCTCAGAGTAGGCTGTGGAGAGAGAGGGGGAATGAGAATTCAAATCTCCTAACTGACTCCAGTATAAGCGTCAACTCTGTGATGAGTGAACCCCTGAATGCTGAACTAAACTCAAATCTGGATGCAAATGCTGCCCTGAATTCAAATTCAAATGGCGCCGGTAATGACAGAAATTTGGTTAGAGCTGAAGAGGGGCGGGTTGAAGAAACTGGTTCAGAGCTTTCTGCGCCATTGATTGATCGTAGAATGAATATCCAAACTCCAAGAACTGAAGATCCAGTGACAAATGAAAGTTTGATGCTGGAGGGGATTGGATTGGGGTCGTCTGGTGCTATAAAGTTAGGTCTAGGAGACTTCATCTTCTATAGCGTCTTGGTCGGCAGAGCAGCTATGTATGACTTTATGACAGTGTATGCATGTTATCTTGCTATTATTGCTGGTCTAGGCATCACTTTGATCCTTTTGGCATTATATCAGAAAGCTTTGCCTGCTCTTCCAGTGTCAATAGGGCTTGGAGTATTGTTTTATTTCTTGACTAGGCTCTTACTTGAAGTATTTGTTGTACAATGTTCCATGAACCTCCTGATGTTCTAA 1386 0.4141 MPHSNQPQHCREAEPFQSLTFPMSQNQRPPTILDSLGEEIVRIIVPVSICMFLVVILVSILNSNSSSVSITSIATIAYSETNSDSSWDKFVGALLNSLAFVVVVTIVTFVLVLLFYFRCTKFLKLYMGFSAFVVLGFLGGEIALFLIEDFSIPIDCITFLLVLFNFSVVGVLAVFMSKMAILVTQAYLVLIGMLVAYWFTMLPEWTTWVLLVAMALYDLAAVLLPIGPLRLLVELAIARDEEIPALVYEARPVNYENSDPRGGVAQSRLWRERGNENSNLLTDSSISVNSVMSEPLNAELNSNLDANAALNSNSNGAGNDRNLVRAEEGRVEETGSELSAPLIDRRMNIQTPRTEDPVTNESLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLILLALYQKALPALPVSIGLGVLFYFLTRLLLEVFVVQCSMNLLMF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00468 461 MobiDBLite consensus disorder prediction 311 330 - -
Bach5g00468 461 Pfam Presenilin 37 451 IPR001108 GO:0004190|GO:0016020|GO:0016485
Bach5g00468 461 SMART psh_8 91 447 IPR006639 GO:0004190|GO:0016020
Bach5g00468 461 Gene3D Presenilin 368 453 IPR042524 -
Bach5g00468 461 PRINTS Presenilin family signature 218 235 IPR001108 GO:0004190|GO:0016020|GO:0016485
Bach5g00468 461 PRINTS Presenilin family signature 201 208 IPR001108 GO:0004190|GO:0016020|GO:0016485
Bach5g00468 461 PRINTS Presenilin family signature 44 54 IPR001108 GO:0004190|GO:0016020|GO:0016485
Bach5g00468 461 FunFam Presenilin 351 452 - -
Bach5g00468 461 PANTHER PRESENILIN 24 461 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00468 Bach-Chr5 3195265 3196650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00468 23 461 Miscellaneous Gene Families AT2G29900 63.122 1.42e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00468 K04505 - cave:132176434 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00468 5 3195265 3196650 Bach5g00468 5 3195265 3196650 ECH