Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00324 ATGTCATCTCCAAGCAAGAGAAGAGAAATGGATGTAATGAAATTGATGATGAGTGATTATACTGTGGAGACAATAAATGATGGGCTCAATGAGTTCAATGTGGAGTTCCATGGTCCAAAAGAAAGCCTTTACGAAGGTGGAGTCTGGAAAATCCGTGTTGAGCTTCCAGACGCATATCCATACAAATCCCCTTCTATTGGATTCGTGAACAAGATATTCCACCCAAATGTTGATGAACTATCTGGCTCTGTATGCTTGGATGTCATTAACCAGTCATGGAGTCCAATGTTTGATCTTCTAAATGTCTTTGAAGTTTTTCTTCCACAACTCTTGCTTTATCCAAATCCTTCTGATCCACTCAATGGTGATGCGGCATCATTAATGATGAAGGACCGAAAGCTATATGATCAAAAAGTTAAAGAGTACTGTGAGCGGTATGCGAAGAAGGAAAACATTACCAACTCTACAGTTGAAGAGGAGAGTGATGAGGAGGAGGATATCAGTGAAGAGGAAAGTGCATCAAGTGACGATGAGATTCCGGGCCACGCTGACCCTTGA 558 0.414 MSSPSKRREMDVMKLMMSDYTVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKLYDQKVKEYCERYAKKENITNSTVEEESDEEEDISEEESASSDDEIPGHADP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00324 185 MobiDBLite consensus disorder prediction 150 185 - -
Bach5g00324 185 MobiDBLite consensus disorder prediction 157 174 - -
Bach5g00324 185 FunFam Ubiquitin-conjugating enzyme 5, E2 1 160 - -
Bach5g00324 185 SUPERFAMILY UBC-like 4 150 IPR016135 -
Bach5g00324 185 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Bach5g00324 185 CDD UBCc 7 143 IPR000608 -
Bach5g00324 185 Gene3D Ubiquitin Conjugating Enzyme 1 162 IPR016135 -
Bach5g00324 185 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Bach5g00324 185 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Bach5g00324 185 Pfam Ubiquitin-conjugating enzyme 11 142 IPR000608 -
Bach5g00324 185 SMART ubc_7 4 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00324 Bach-Chr5 2272170 2274197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00324 4 115 Miscellaneous Gene Families AT3G17000 24.167 3.31e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00324 K10576 - qsa:O6P43_030896 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00324 5 2272170 2274197 Bach5g00324 5 2272170 2274197 ECH