Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00293 ATGAAGGCAACATTGAGATACTTAGCAGGAATTGCAGGCCCTAGTGGCTTTGGCTCAAATTCAACAGCTGAGCAAGTTACACAAGACTGTTCTTCCTTCCTCCCTTTCCATCTAACTGCTCTCATTACTGGGGCGACTTCTGGTATTGGAGCTGAAACGGCCAGAGTGTTAGCAAAGAGAGGAGTGAGAGTTGTGATTGGTGCGAGGGATCTGAAGAAGGCAAGAGAAGTCAGAGAGAATATCCTTCAAGAGACTCCGAATGCTGAGGTTATTCTGTTGGAGATTGATCTCAGCTCTTTTGCCTCCGTACAGAGATTTTGTTCCGAGTTTTTAGCACTTGGAATGCCCCTTAATATCCTCATAAACAATGCTGGAATATTCTCTCAGAACTTGGAGTTTTCTGAAGACAAAATTGAGATGACATTTGCCACAAATTACTTAGGACATTTTTTGTTAACGGAAATGCTTTTAGAGAAAATGATAGAAACAGCAGAGATGACAGGATTTCAAGGTAGAATAATAAACGTATCTTCCGTTATACACAGCTGGGTTAAAAGAGATGGCTTTCGTTTCAACGACTTACTCAACGGAATAAATTATAATGGCACACGTGCATATTCTCAATCAAAATTGGCCAATATTTTGCATGCAAAGGAAATGGCTAGACAGCTTAAGGCGAGGAATGCTAGAGTAACTATCAATGCAGTCCATCCAGGAATCGTGAAGACAGGAATTATTAGAGCTCACAAGGGCTTGTTAACAGATTCTCTGTTTTTCATTGCATCCAAGTTACTCAAAACGACATCTCAGGGTGCATCAACGACATGTTATGTGGCTCTGAGCCCACAGACAGAAGGGGTCAGTGGGAAATACTTTGCAGATTGTAATGAAAACAAATGGTCAAGTTTAGCAAATGACGAATCTGAAGCTCAAAAGCTATGGAAAAACACCCGTGCATTGCTTCACAAAAGATTATGCCAAGCCGCAACATGA 993 0.4129 MKATLRYLAGIAGPSGFGSNSTAEQVTQDCSSFLPFHLTALITGATSGIGAETARVLAKRGVRVVIGARDLKKAREVRENILQETPNAEVILLEIDLSSFASVQRFCSEFLALGMPLNILINNAGIFSQNLEFSEDKIEMTFATNYLGHFLLTEMLLEKMIETAEMTGFQGRIINVSSVIHSWVKRDGFRFNDLLNGINYNGTRAYSQSKLANILHAKEMARQLKARNARVTINAVHPGIVKTGIIRAHKGLLTDSLFFIASKLLKTTSQGASTTCYVALSPQTEGVSGKYFADCNENKWSSLANDESEAQKLWKNTRALLHKRLCQAAT 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00293 330 CDD retinol-DH_like_SDR_c_like 39 314 - -
Bach5g00293 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 300 IPR036291 -
Bach5g00293 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 126 IPR002347 -
Bach5g00293 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Bach5g00293 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 IPR002347 -
Bach5g00293 330 Pfam short chain dehydrogenase 39 180 IPR002347 -
Bach5g00293 330 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Bach5g00293 330 PRINTS Glucose/ribitol dehydrogenase family signature 115 126 IPR002347 -
Bach5g00293 330 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Bach5g00293 330 PRINTS Glucose/ribitol dehydrogenase family signature 165 181 IPR002347 -
Bach5g00293 330 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Bach5g00293 330 Gene3D - 37 325 - -
Bach5g00293 330 PANTHER RETINOL DEHYDROGENASE 14 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00293 Bach-Chr5 2037479 2039885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00293 41 248 Acyl Lipid Metabolism Gene Families AT3G55310 31.163 5.70e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00293 - - pcin:129309518 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00293 5 2037479 2039885 Bach2g02164 2 28656093 28659186 BWGD
Bach5g00293 5 2037479 2039885 Bach5g00293 5 2037479 2039885 ECH