Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00286 ATGGGGGAGAGTACAGTGGGTGGTGCTTCGCTGCCGTCGGGTCCAGACGCCGTGAAGCGGAGGGTCACTTACTTCTACGAACCCACGATCGGCGATTACTACTATGGCCAAGGCCACCCAATGAAACCCCACCGTATCCGCATGGCTCACAATCTCATCATTCATTACTCGCTTCATCGACGGATGGAAATCAACCGTCCCTTCCCCGCCGGACCCGACGATATCCGCCGTTTCCATTCCGATGACTACGTCGAATTCCTCCGTTCCGTCTCGCCGGAGACTCTCGGTGAGAACGCCTTCTCTCGTCAGCTCAAGCGCTTCAATGTTGGCGAGGACTGTCCCGTCTTCGACGGCTTATTCACTTTTTGTCAGGCCTCTGCCGGTGGCTCCATTGGTGCTGCCGTCAAGTTGAACCGTGCCGACGCTGATATTGCTATCAATTGGGCTGGTGGCTTGCATCATGCTAAGAAGGCTGAGGCTTCGGGCTTTTGTTATGTCAATGATATTGTTCTTGGCATTCTTGAGCTTCTCAAGTCTCACAGGCGTGTATTGTATGTTGACATTGATGTCCACCATGGAGATGGTGTTGAGGAGGCATTTTATACCACTGACAGAGTGATGACAGTGTCTTTCCATAAGTTTGGGGACTTCTTCCCAGGCACTGGTCACATTAGAGACACTGGGGTGGGCCCTGGGAAGAACTATGCTCTAAATGTCCCACTGAATGATGGAATGGATGATGACAGTTTCCGTGATTTATTTCGGCCCCTCATTCAAAAAGTCATGGAGGTTTATCAACCTGATGCTGTTGTTCTTCAGTGTGGAGCGGATTCATTATCTGGTGACAGATTGGGATGCTTCAACTTGTCTGTGAAGGGTCATGCTAATTGCCTTCGTTTCCTTAGATCTTTCAATGTTCCTCTAATGGTCTTGGGTGGGGGAGGATATACAATTCGGAACGTTGCACGCTGCTGGTGCTATGAGACGGCAGTGGCAGTAGGAGTGGAACCTGAAAATAATTTGCCTTACAATGATTATTATGAGTATTTTGGTCCAGATTATACTCTTCATGTTGATCCCGGAAATGTGGAGAATTTAAACTCACCCAAGGATATGGAAAAAATAAGGAACACACTACTAGAACAGATTACTAGACTTCCTCATGCGCCCAGTGTGCCTTTCCAAATGACGCCATCCACCATTGAAGAACCAGAAGAGGAAGAAGAAGACATGGATCGAAGACCAAAGCGTCGCATATGGAGTGGTGAAGATTATGATTCCGACCATGAGCAGGCTAGTTCGAAGTGCTCAAATTTAACTGGCAATCTGAGGGATGTTGCAGATGAGATGGAAGAAGAGAAGCCAGAAGAGCCTCCTTCATCTTGACAACGTAGCAAGTTATAACGCAGCTTATATCTATGTATGATTTAATTGTGATATATTCTCTTGAGGAGGGAGCTAATTACATTGAGCTATATAAAACTTTTTGTTTCTTTCACCCCATGGTGGAGGGATACTTTTAGAATACAAGATATACTGAATAGGCAGTTGTGGTCGTTGAGACATTCTCACCTCTCCTTGTTTTAT 1587 0.4675 MGESTVGGASLPSGPDAVKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIIHYSLHRRMEINRPFPAGPDDIRRFHSDDYVEFLRSVSPETLGENAFSRQLKRFNVGEDCPVFDGLFTFCQASAGGSIGAAVKLNRADADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKSHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDTGVGPGKNYALNVPLNDGMDDDSFRDLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHANCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENNLPYNDYYEYFGPDYTLHVDPGNVENLNSPKDMEKIRNTLLEQITRLPHAPSVPFQMTPSTIEEPEEEEEDMDRRPKRRIWSGEDYDSDHEQASSKCSNLTGNLSRDVADEMEEEKPEEPPSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00286 462 MobiDBLite consensus disorder prediction 390 462 - -
Bach5g00286 462 Pfam Histone deacetylase domain 39 330 IPR023801 -
Bach5g00286 462 PRINTS Histone deacetylase signature 107 124 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PRINTS Histone deacetylase signature 41 58 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PRINTS Histone deacetylase signature 169 185 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PRINTS Histone deacetylase signature 74 92 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PRINTS Histone deacetylase signature 128 148 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PRINTS Histone deacetylase signature 245 263 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PRINTS Histone deacetylase signature 228 241 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 PIRSF HDAC_I_euk 8 461 IPR003084 GO:0004407|GO:0016575
Bach5g00286 462 FunFam Histone deacetylase 18 397 - -
Bach5g00286 462 PANTHER HISTONE DEACETYLASE 2-RELATED 9 345 - -
Bach5g00286 462 Gene3D Histone deacetylase domain 18 393 IPR037138 -
Bach5g00286 462 MobiDBLite consensus disorder prediction 410 431 - -
Bach5g00286 462 CDD HDAC_classI 25 332 - -
Bach5g00286 462 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Bach5g00286 462 PRINTS Histone deacetylase superfamily signature 150 173 IPR000286 -
Bach5g00286 462 PRINTS Histone deacetylase superfamily signature 182 197 IPR000286 -
Bach5g00286 462 SUPERFAMILY Arginase/deacetylase 20 384 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00286 Bach-Chr5 1982023 1985356 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00286 K06067 - csv:101204443 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00286 5 1982023 1985356 Bach5g00286 5 1982023 1985356 ECH