Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach5g00279 | CAAACCCTTCCTCACTCACTCACTCTCTCACTCTCTCTCTCTCTCACAGAGTGGAAAGAAATGTATCCACTCGCGGGAAATTTTCCGATTGTCTCATACGTCATGTCTCGTCTCCCTTCCGTGAAAGACGGAGCCAGCATCGCCACTACCGATTCTGGTTCAGGTTTGCACGAGATAGACCTCGAAAAAGCTCGTGATCCGCCACAGCGACCACCGTCCGATCCTTCTAGTTCTTCTTATTCGGGTCTAAACCACCCCGAGATTGTTCAACGAATGCCTCACCTCACAGACCCGAAATTATTGGATGCCATGACGCGCGCCATCTCTGACGTGACCCAGACCCGATCCGTACTCAAGCTCATCGGACAGCGACCCGACCATGAAACCGTCGACAATGCTAAGGCCCAGCTTATCGATTTAGAGGCTCAGTTGTCCAGACAACTGGAAGAGACTGTGTTAGCGCCAAGGCCCGATGATATCGACGTTCAACAGTGGCGGGCACACCTGGCCGAAAAAGAGAAGGAGATTAGGAATTTAGTTGAGAAAGAGAAGCGAATCTACAAATCCGTGATACAGTTGGATGAGATGCACGAAGCTTATGAGAAACTACTTCATGATGCAGAGAAGAGATTAGAGAAAATTTATGAGTCAGCTAAGAGAGGAGCAGAAGATGAGGAAGATGGTAAGCCTGTTGAGGAAGAGGTTAACGAAGAGATTGTGGGCATACTGCGGGAGGCCAACGGAAAAGGGATGGAACGAGTGGATATTTCGGGACGGAGCCTGAGATTGCTGCCTGAGGCGTTTGGAAGGATTCCTGGGTTGGTGGTGCTTAACGTTTCAAGCAATCAGCTCACGGTGATTCCCGACTCAATTGCTGGACTACAAAATCTTGAGGAGCTCAATCTCTCCTCAAATCTTTTGCAGTCATTGCCAGATTCAATTGGTTTGTTACAAAAGTTGAGATTCCTGAATGTCTCTGGAAACAAGTTGAGCGCTCTTCCTGATTCCATCTCTCAATGCAGGTCATTGGTGGAACTGGATGCAAGCTTCAACAGCCTGTCGTATTTGCCAACGAACATTGGATATGAATTAGTTCATTTGCAGAAGCTTTCTGTTCAATTGAACAAGCTGCGATCTTTTCCCTCATCTCTTTGCGAGATGAAGTCCTTGCGCTATCTGGATGCTCACTTTAACGAGTTACATGGACTCCCAATTGCTATAGGGAGATTAATTAATCTTGAAGTTCTCAACCTGAGCAGTAATTTCGCTGACCTTCAAGAACTTCCCGAGACATTCGGCGATCTGACTAACCTGAAGGAATTGGATCTAAGCAACAATCAAATTCATGCTCTTCCTGATACATTTGGTCGCCTTGAGAGTTTGACCAAACTCAACTTGGAGCAGAACCCTCTTGAATTGCCACCAATGGAGATCGTAAAACAAGGTGTTGAAGCCGTGAAGACTTTCATGGCTAAGAGGTGGATCGATATATTGGTCGAGGAAGAAAGGAAAAGCACGCATGAAATGCAAGAACAAGCAGAGAATGGTTGGTTAAATCGTAGCACCTCCTGGTTGAAAAATTCCGTAACAGGTATTTCTGGTAGTGTAACTGACATTCTGGGATCTGCCATGGGATCTCCTAAATCTCCCAGAGATGCTTATCTTGACCAGCAGCTATGA | 1680 | 0.4649 | MYPLAGNFPIVSYVMSRLPSVKDGASIATTDSGSGLHEIDLEKARDPPQRPPSDPSSSSYSGLNHPEIVQRMPHLTDPKLLDAMTRAISDVTQTRSVLKLIGQRPDHETVDNAKAQLIDLEAQLSRQLEETVLAPRPDDIDVQQWRAHLAEKEKEIRNLVEKEKRIYKSVIQLDEMHEAYEKLLHDAEKRLEKIYESAKRGAEDEEDGKPVEEEVNEEIVGILREANGKGMERVDISGRSLRLLPEAFGRIPGLVVLNVSSNQLTVIPDSIAGLQNLEELNLSSNLLQSLPDSIGLLQKLRFLNVSGNKLSALPDSISQCRSLVELDASFNSLSYLPTNIGYELVHLQKLSVQLNKLRSFPSSLCEMKSLRYLDAHFNELHGLPIAIGRLINLEVLNLSSNFADLQELPETFGDLTNLKELDLSNNQIHALPDTFGRLESLTKLNLEQNPLELPPMEIVKQGVEAVKTFMAKRWIDILVEEERKSTHEMQEQAENGWLNRSTSWLKNSVTGISGSVTDILGSAMGSPKSPRDAYLDQQL | 539 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach5g00279 | 539 | Pfam | Leucine rich repeat | 392 | 451 | IPR001611 | GO:0005515 | |
| Bach5g00279 | 539 | Pfam | Leucine rich repeat | 252 | 310 | IPR001611 | GO:0005515 | |
| Bach5g00279 | 539 | Gene3D | Ribonuclease Inhibitor | 165 | 342 | IPR032675 | - | |
| Bach5g00279 | 539 | ProSiteProfiles | Leucine-rich repeat profile. | 276 | 297 | IPR001611 | GO:0005515 | |
| Bach5g00279 | 539 | FunFam | Plant intracellular Ras-group-related LRR protein 9 | 152 | 335 | - | - | |
| Bach5g00279 | 539 | ProSiteProfiles | Leucine-rich repeat profile. | 299 | 320 | IPR001611 | GO:0005515 | |
| Bach5g00279 | 539 | MobiDBLite | consensus disorder prediction | 42 | 64 | - | - | |
| Bach5g00279 | 539 | Coils | Coil | 170 | 197 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 321 | 343 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 297 | 320 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 251 | 273 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 390 | 414 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 438 | 461 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 344 | 367 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 274 | 296 | IPR003591 | - | |
| Bach5g00279 | 539 | SMART | LRR_typ_2 | 415 | 437 | IPR003591 | - | |
| Bach5g00279 | 539 | FunFam | Plant intracellular Ras-group-related LRR protein 2 | 339 | 512 | - | - | |
| Bach5g00279 | 539 | SUPERFAMILY | L domain-like | 228 | 451 | - | - | |
| Bach5g00279 | 539 | Coils | Coil | 110 | 130 | - | - | |
| Bach5g00279 | 539 | PRINTS | Leucine-rich repeat signature | 415 | 428 | - | - | |
| Bach5g00279 | 539 | PRINTS | Leucine-rich repeat signature | 277 | 290 | - | - | |
| Bach5g00279 | 539 | PANTHER | LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 | 289 | 452 | - | - | |
| Bach5g00279 | 539 | Coils | Coil | 142 | 162 | - | - | |
| Bach5g00279 | 539 | Gene3D | Ribonuclease Inhibitor | 343 | 471 | IPR032675 | - | |
| Bach5g00279 | 539 | ProSiteProfiles | Leucine-rich repeat profile. | 417 | 438 | IPR001611 | GO:0005515 | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 390 | 411 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 297 | 316 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 274 | 293 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 320 | 339 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 344 | 363 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 367 | 386 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 415 | 434 | - | - | |
| Bach5g00279 | 539 | SMART | LRR_bac_2 | 251 | 270 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach5g00279 | Bach-Chr5 | 1926754 | 1930149 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach5g00279 | 266 | 490 | Receptor kinase-like Gene Family | AT5G56040 | 29.961 | 2.75e-14 | 74.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach5g00279 | - | - | gmx:100803823 | 676.396 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bach5g00279 | 5 | 1926754 | 1930149 | Bach2g02183 | 2 | 28797808 | 28801143 | BWGD | |
| Bach5g00279 | 5 | 1926754 | 1930149 | Bach5g00279 | 5 | 1926754 | 1930149 | ECH |