Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00223 TTATAATGCTCGTTTTACTTCGTGACTTTACCCGCTGTTTATCGTTATCGCAGTTTTAGGGTTTCAGTCTTCAATGGCGTTATACCTACTATACGAATCTGCTTCTGGGTTCGCTCTACTGCATGCTCATGGTCTTGATGAAATTGGGCAGAACGTCGAAGCTGTTCGGAACTCTGTTTCCGACTTGAACAGGTTTGGGAAGGTCGTGCAGCTTACAGCTTTTAATCCTTTTGAGTCTGCTCTCGATGCCCTTAAGCAGTGCAACGCCGTCTCTGAAGGCTTATTGACTGATGAGTTGAGGAGTTTTCTGGAGATCAATCTACCTAAAGTTAAGGAAGGTAAGAAGGCAAAGTTCAGTTTAGGAGTAGCAGATCCTAAAATTGGTTCTCAAGTCTCTGAAGTGACTAAAATTCCTTGCCAAAGTAACGAATTTGTCAATGAGCTGCTTCGTGGTGTACGGCTTCATTTTGACAGGTTTATCAAGGATCTTAAGCCAGGAGATTTGGAGAAGGCCCAACTTGGCCTGGGGCATAGTTACAGCAGGGCAAAGGTGAAATTTAATGTCAACCGCGTTGACAACATGGTAATTCAGGCAATCTTCCTTCTTGATACACTTGATAAGGATATTAATTCCTTCTCCATGAGAGTCAGAGAATGGTACTCATGGCATTTTCCTGAGCTGGTGAAGATTGTAAGTGATAATTATCTGTATGCCAAAGTTGCAAAATATATTGAGGATAAGTCAAAGTTGGCAGAAGACAAAATCCCAGACTTAACAGAGATAGTTGGTGATGAAGATAAGGCTAAGGAGATTGTGGAAGCTGCCAAGGCATCCATGGGACAGGATTTGAGCCCAGTTGATCTGATCAATGTCCAGCAATTTGCACAGAGAGTAATGGACCTCTCTGAGTACAGAAGGAAGCTTTATGATTATCTTGTCACTAAGATGAATGACATTGCACCTAATTTGGCCTCACTTATTGGTGAAGTTGTTGGTGCTCGTTTGATTTCTCATGCTGGTAGTCTCACAAATTTGGCTAAGTGCCCCTCTTCCACTCTTCAAATTCTTGGTGCAGAGAAGGCATTGTTCAGGGCGTTGAAAACCAGGGGAAACACTCCCAAGTATGGTTTGATTTTCCATTCATCCTTTATTGGTCGGGCATCTGCCAGAAATAAAGGTCGAATGGCTCGATATCTTGCAAACAAGTGTTCAATTGCATCACGTATCGATTGCTTTTCAGAGAGGGGTACTACTTCTTTTGGAGAGAAACTCAAAGAACAAGTGGAGGAGCGACTTGACTTCTATGATAAGGGAGTTGCCCCTCGTAAGAACATAGATGTCATGAAAGCTGCTATTGAAATTGCTGAAAACAAAGATACAGAGATGGAAACAGAAGTAGTGCACGTTGAACCTTCAAGCAAGAAAGACAAGAAGAAGAAGAAGTCAAAAGCTGCTGCTGACGATGGTGAGAATATGGCTATAGATAAATCCACACCAATTACGAATGATGGTGATGCTTTGGAAGAGCATAAATCAGAAAAGAAAAAGAAGAAGAAAGAAAAGAGGAAATTGGACAATGAGATGGATGTTGATAATGAAGATGGTGTCAGTGGGGTTGAACCCGAGAAAGATGGAAATGTTGAAAAGAAGAAGAAGAAGAAAGACAAAAGGGATGACAATGGAGAAATATTGGAGGTTGATAATGAAACTAAAAAGAAAAAGAAGAAATGAAAAAACAAAGTAAGCATGCTAGTTGAAACTTGAGCGGTGCAGATTTAGCTGTAAGAAGTTTTGCTTTTGTATTATCCTGGGTGGTGATACATATTATTAACGTTGAACTGCCAGATGCGCACTTGTCTGGTTATCTTTATTCCTTTTGTTATTCATATAAGACTCTCTCCAATGTTTTAATTGTAATTTTTATTGAGTTAT 1933 0.4035 MALYLLYESASGFALLHAHGLDEIGQNVEAVRNSVSDLNRFGKVVQLTAFNPFESALDALKQCNAVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVADPKIGSQVSEVTKIPCQSNEFVNELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVSDNYLYAKVAKYIEDKSKLAEDKIPDLTEIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSERGTTSFGEKLKEQVEERLDFYDKGVAPRKNIDVMKAAIEIAENKDTEMETEVVHVEPSSKKDKKKKKSKAAADDGENMAIDKSTPITNDGDALEEHKSEKKKKKKEKRKLDNEMDVDNEDGVSGVEPEKDGNVEKKKKKKDKRDDNGEILEVDNETKKKKKK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00223 552 SUPERFAMILY Nop domain 163 412 IPR036070 -
Bach5g00223 552 Gene3D - 141 298 - -
Bach5g00223 552 MobiDBLite consensus disorder prediction 478 552 - -
Bach5g00223 552 FunFam Nucleolar protein 56 140 298 - -
Bach5g00223 552 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 530 IPR045056 GO:0030515|GO:0031428|GO:0032040
Bach5g00223 552 FunFam Nucleolar protein 56 299 411 - -
Bach5g00223 552 SMART NOSIC_2 170 222 IPR012976 -
Bach5g00223 552 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Bach5g00223 552 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Bach5g00223 552 Gene3D Nop domain 299 423 IPR042239 -
Bach5g00223 552 MobiDBLite consensus disorder prediction 436 552 - -
Bach5g00223 552 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Bach5g00223 552 Coils Coil 483 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00223 Bach-Chr5 1572485 1575772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00223 K14564 - gmx:100779446 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00223 5 1572485 1575772 Bach5g00223 5 1572485 1575772 ECH