Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01184 ATGAGAACCCACTTTCCCCCATTTCAAGTGTTATTCTTCTGTCTATCCCTTCTAGCGGGTCTATCCAAACCCGATCCCGACCCCCTTCAAGATTACTGTGTTGCAGATACCAAAAAGCCTCGAACTTTGTTCATCAATGGTGCACCTTGCATTGACCCAAATGGAGCAACCTCATCCCATTTTACTACATCTTCATTAGCCAAGGTTGGTAACACCAGTGCTAACCAGTTCGGCTTTAGTATCACCCTAACTAACATTACTAATCTTCCCGGGCTTAACACCTTGGGCTTGGTACTGGCCCGGGTTGATATAGCAGCAAATGGGATCGTGCCACCTCATTCACACCCGCGGGCCTCGGAAGTGACCACTTGCCTCAAGGGTGTCCTGCTTGTGGGCTTTGTTGACACATCCAACAGGGTCTTTACCCAACAAATACGGGCCGGAGAGTCATTTGTGTTCCCAAAGGGCTTGATCCATTTCCTTTTCAATCTGGATTCTGGGAAGCCCGCATTAGCAGTGTCTGGGCTCAATAGCCAAAACCCAGGTGCACAAATTGCATCAGTTGCCACATTCACAAGCAAACCACCTATTCCAGATCAAGTACTACAAAAGGCTTTCAAAATTACCAAAGAGGACGTGGCAAGAATCTGTAAGAACCTTGGAGGGTGA 669 0.4768 MRTHFPPFQVLFFCLSLLAGLSKPDPDPLQDYCVADTKKPRTLFINGAPCIDPNGATSSHFTTSSLAKVGNTSANQFGFSITLTNITNLPGLNTLGLVLARVDIAANGIVPPHSHPRASEVTTCLKGVLLVGFVDTSNRVFTQQIRAGESFVFPKGLIHFLFNLDSGKPALAVSGLNSQNPGAQIASVATFTSKPPIPDQVLQKAFKITKEDVARICKNLGG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01184 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 22 216 - -
Bach4g01184 222 ProSitePatterns Germin family signature. 108 121 IPR019780 GO:0030145
Bach4g01184 222 CDD cupin_OxOx 25 220 IPR001929 GO:0030145
Bach4g01184 222 FunFam germin-like protein subfamily 2 member 1 24 222 - -
Bach4g01184 222 Pfam Cupin 69 213 IPR006045 -
Bach4g01184 222 Gene3D Jelly Rolls 24 222 IPR014710 -
Bach4g01184 222 PRINTS Germin signature 177 192 IPR001929 GO:0030145
Bach4g01184 222 PRINTS Germin signature 113 133 IPR001929 GO:0030145
Bach4g01184 222 PRINTS Germin signature 143 163 IPR001929 GO:0030145
Bach4g01184 222 SMART Cupin_1_3 64 214 IPR006045 -
Bach4g01184 222 SUPERFAMILY RmlC-like cupins 25 218 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01184 Bach-Chr4 8183275 8183943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01184 7 221 Miscellaneous Gene Families AT5G39130 40.639 3.40e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01184 - - gmx:100811231 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01184 4 8183275 8183943 Bach4g01184 4 8183275 8183943 ECH