Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00977 ATGCTGATGGGGCCAGAGGGAGAAGAATTCAAGCGTAGAATGTCTCGGATGTACGATTCGGTGAGTCGCACGTGCCTGCCTCCCAAGGAAAAATCTACCGCCTGCATTTTCTTGCTCGCTGACCTTGCTTATAAGAAGACTGGCTACACAGATAACCGCGCTCCTTTGACGATATCTGAGTTACCGGAGATCTCTGTTACAGACCAGTTCACCATGACGATAAAAACTGTCAAAATCAGTAATGTTTCCTTGGGAGCAACTGAGCGGGACCTCAAAGAGTTCTTTTCTTTTTCTGGTGATATTGAATATCTTGAAATGCAGAGTCATGATGAGTGGTCACAAATTGCATATGTTACCTTCAAGGATTCACAAGGAGCTGAGACTGCGGTGCTACTATCGGGAGCAACAATAGTTGATCTATCAGTTACAATTACTCTGGATCCGGATTACAAGCTTCCACCTGCTGCCCTTGCATCAGCTGCTAAGGAAAGCAAAAGTCCTGGGGGTGCTGAATCTGCTTTGCACAAAGCGGAGGATGTGGTCACTGGCATGCTGGCCAAGGGCTTTATCTTAGGCAAAGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCACCGGTTAACTTCAACAGCCTCAGCAAAAGCTGCATCCATTGACCAGAAAATCGGGTTCACTGAGAAAATAAGTGCAGGTGCTTCAGTTGTGAGTGATAGAGTTCGAGAAGTGGATCAAAAATTTCAGGTTTCAGAGAAAACCAAATCAGCATTTGCAGCTGCTGAACAGAAGGTCAGTAGTGCTGGTTCAGCTATCATGAAGAACCGCTATGTACTCACTGGGACTACATGGGTAACGGGTGCTTTCAATAAGGTTTCTAAGGCAGCTGGGGAAGTAGGACAGAAGACGAAAGAGAAAGTAGAGCATGCTGAAGAGGAACAGAAGCGAAAAGTAGAGGATCAGTATGCACAGGTTCTATCTGAGTCCCCAAAAGCCAGTGCAACAAGTGAGCAGCATCCTTCCAAGCCTGCTCCTGCTCAGGGTTTGATCCTCTGATTTGCTTCTTGTATATACCTTTGGAACTTCTGCAAATTGTTTCTATGTGATGGCCAAGCGTGCTTCTTTTTTCTTTTCCCCTTTTGCGATGGGGCTATGGGGGGTTGGGTGGAGGTCGGAGGAGCTGAAATTACAACAGCGTTTACCAGTTACTTAGACAAAGTTTGAAATCGTTAATTTTCTTCTATAGAAAGATTATAAACTTA 1259 0.4504 MLMGPEGEEFKRRMSRMYDSVSRTCLPPKEKSTACIFLLADLAYKKTGYTDNRAPLTISELPEISVTDQFTMTIKTVKISNVSLGATERDLKEFFSFSGDIEYLEMQSHDEWSQIAYVTFKDSQGAETAVLLSGATIVDLSVTITLDPDYKLPPAALASAAKESKSPGGAESALHKAEDVVTGMLAKGFILGKDAVNKAKTFDEKHRLTSTASAKAASIDQKIGFTEKISAGASVVSDRVREVDQKFQVSEKTKSAFAAAEQKVSSAGSAIMKNRYVLTGTTWVTGAFNKVSKAAGEVGQKTKEKVEHAEEEQKRKVEDQYAQVLSESPKASATSEQHPSKPAPAQGLIL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00977 350 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 79 137 IPR000504 GO:0003723
Bach4g00977 350 Gene3D - 72 145 IPR012677 -
Bach4g00977 350 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 69 313 - -
Bach4g00977 350 FunFam RNA recognition motif-containing protein 72 145 - -
Bach4g00977 350 SMART rrm1_1 76 145 IPR000504 GO:0003723
Bach4g00977 350 MobiDBLite consensus disorder prediction 325 341 - -
Bach4g00977 350 MobiDBLite consensus disorder prediction 302 321 - -
Bach4g00977 350 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 75 149 IPR000504 GO:0003723
Bach4g00977 350 SUPERFAMILY RNA-binding domain, RBD 66 147 IPR035979 GO:0003676
Bach4g00977 350 MobiDBLite consensus disorder prediction 302 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00977 Bach-Chr4 6575589 6582004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00977 - - gmx:100809613 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00977 4 6575589 6582004 Bach4g00977 4 6575589 6582004 ECH