Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00962 ATGGATCGCTTACGTTGTTTTCGGATGATGCTGAGACCCAAAACCTATGCTGTTCTATCATATTCTCTTTCTTTGCTTCTTATCTTGTTCTTCTTCGGCTCTGCAAACGCAGCCTTCAACAACCTCACCACCATACCCTTTAACGACGGCTATTCTCCACTTTTCGGAGACGACAACGTCGTTCGCTCCTCCGATGGCAACGGTGTCCGTCTCAACCTCGATCGCTTTTCAGGTTCCGGTTTCATTTCCTCGAATATGTACCAGTACGGTTTCTTCAGCGCTAGAATCAAGTTGCCATCTGCATATACTGCTGGTATTTGTGTTGCCTTCTATACATCCAACGGTGATGTGTTTGAGAAGACCCACGATGAGTTGGACTTTGAATTCTTAGGCAATATTGCAGGGAAGCCATGGAGGTTTCAGACAAACTTGTACGGCAACGGCAGCACCCACCACGGGCGGGAAGAGCGGTACCGGCTTTGGTTCGATCCTACCAAAGAGTTTCACAGATACAGTATCCTTTGGACAGCCAAGAACATCATATTTTACATTGATGAAGTTCCAATTAGAGAAGTTATAAGAAATAAGGAAATGGGTGCTGACTACCCATCAAAGCCAATGTCATTATACGCCACCATATGGGATGCCTCAGACTGGGCCACGTCCGGCGGCAAATACAGAGTGAACTACAAGTATGCACCTTTTGTATCAGAATTCAAGGACTTAGCCATCGAGGGTTGCTCCGTTGACCCCATCCAAGAAATCCCCGGCGGAGTTGCTTGCTATGACAAACTTGACAAGCTTGAAGCCCAAGACTACGCCACCGTCACCACTCGGCGGCGACTCGCCATGCGTAGGTTCCGTCAGCGTTTCATATACTATTCGTATTGCTACGACACATTGAGGTACCCCATATCACTACCGGAATGTGTTATTGATCCCTCGGAGAGGCTGAGATTCAAGGAAACCGGTAGGTTGAAGTTTGGCGGCAGCCACCGGCGGCGGTCTAAGAGAGGAGGCCGTACCTCCACTCCGGTGGTGGAAGATGATCAGACTGATTAGAGATGATTGATGAGTGTAAATATTAGTGTCCATTCTTATGTGGTGTGCTTCTTTTTCATTCTTATTTGATACATATAAATAAACTAGTTGATTATATTCGGTAAGTTTTTG 1173 0.4655 MDRLRCFRMMLRPKTYAVLSYSLSLLLILFFFGSANAAFNNLTTIPFNDGYSPLFGDDNVVRSSDGNGVRLNLDRFSGSGFISSNMYQYGFFSARIKLPSAYTAGICVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHHGREERYRLWFDPTKEFHRYSILWTAKNIIFYIDEVPIREVIRNKEMGADYPSKPMSLYATIWDASDWATSGGKYRVNYKYAPFVSEFKDLAIEGCSVDPIQEIPGGVACYDKLDKLEAQDYATVTTRRRLAMRRFRQRFIYYSYCYDTLRYPISLPECVIDPSERLRFKETGRLKFGGSHRRRSKRGGRTSTPVVEDDQTD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00962 353 Pfam Glycosyl hydrolases family 16 51 231 IPR000757 GO:0004553|GO:0005975
Bach4g00962 353 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 14 239 IPR000757 GO:0004553|GO:0005975
Bach4g00962 353 PIRSF EndGlu_transf 12 315 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bach4g00962 353 Gene3D - 33 310 - -
Bach4g00962 353 CDD GH16_XET 43 310 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bach4g00962 353 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 41 310 IPR044791 GO:0004553
Bach4g00962 353 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 314 IPR013320 -
Bach4g00962 353 ProSitePatterns Glycosyl hydrolases family 16 active sites. 124 134 IPR008263 GO:0004553|GO:0005975
Bach4g00962 353 MobiDBLite consensus disorder prediction 328 353 - -
Bach4g00962 353 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 273 310 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00962 Bach-Chr4 6458447 6461074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00962 20 332 Glycoside Hydrolase AT1G32170 71.885 2.94e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00962 K08235 - gmx:100786236 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00962 4 6458447 6461074 Bach4g00962 4 6458447 6461074 ECH