Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00898 GTTGAAATCTTGGTGTTTCGAATTTTATACTCCTTGGGACTGAAGGGTTCAAGTCATTAATTGTCATTTTAGCTCTCTCATCAGGTAATGGTTATCAAACTGCTGAAAGACATGCCTATGCCCCAGGAGCAATCGGGTTCATTGAAAAGGAGCTTGTCAAGAAGGCGCTCGTTGAGGCCTGGGGTAGATACGGATGACAGGGGCTGGACGTCACTTCATGTGTTCTCTCGGAAAGGAGATATCAAAGTGGTAAGAAAACTTCTTGATGAAGGAATGGATGTAAATGCAGCTGCATGGGGCCCAAAATCAAAAGGGGTGACCCCTCTCCACCTTGCTGCTGAAGGTGGCCACATTGAAGTCATGGATGAACTGCTTGAGCGTGGTGCCGATATTGATGCCAGAATTAAGGGTGCTTGTGGCTGGACACCACTCCATATTGCTGCCAAAGAAAGGAGAAGGAAGGCGGTGAAATTCCTGATAGAGAATGGAGCATTCATGCCTCCTGATATCAATGATAGCCGATTTAATCCCCCTCTTCATTACTGCCCTGGACTTGAATGGGCCTATGAGGAGATGAAACGATTTCAACAACAAGAAAACTCATCGGCGGGAGAAACCACTGACAGCTCAGAAAGCTAAAACTCGTTCTTCGGAGTTGTTGTTGATGCTTG 671 0.4635 MVIKLLKDMPMPQEQSGSLKRSLSRRRSLRPGVDTDDRGWTSLHVFSRKGDIKVVRKLLDEGMDVNAAAWGPKSKGVTPLHLAAEGGHIEVMDELLERGADIDARIKGACGWTPLHIAAKERRRKAVKFLIENGAFMPPDINDSRFNPPLHYCPGLEWAYEEMKRFQQQENSSAGETTDSSES 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00898 183 Pfam Ankyrin repeat 110 135 IPR002110 GO:0005515
Bach4g00898 183 Gene3D - 23 177 IPR036770 -
Bach4g00898 183 PRINTS Ankyrin repeat signature 126 140 IPR002110 GO:0005515
Bach4g00898 183 PRINTS Ankyrin repeat signature 76 91 IPR002110 GO:0005515
Bach4g00898 183 ProSiteProfiles Ankyrin repeat region circular profile. 75 105 - -
Bach4g00898 183 MobiDBLite consensus disorder prediction 7 34 - -
Bach4g00898 183 SUPERFAMILY Ankyrin repeat 35 153 IPR036770 -
Bach4g00898 183 ProSiteProfiles Ankyrin repeat profile. 110 135 IPR002110 GO:0005515
Bach4g00898 183 SMART ANK_2a 75 104 IPR002110 GO:0005515
Bach4g00898 183 SMART ANK_2a 38 67 IPR002110 GO:0005515
Bach4g00898 183 SMART ANK_2a 110 143 IPR002110 GO:0005515
Bach4g00898 183 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Bach4g00898 183 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 34 135 - -
Bach4g00898 183 ProSiteProfiles Ankyrin repeat region circular profile. 38 67 - -
Bach4g00898 183 ProSiteProfiles Ankyrin repeat profile. 38 70 IPR002110 GO:0005515
Bach4g00898 183 ProSiteProfiles Ankyrin repeat region circular profile. 110 135 - -
Bach4g00898 183 Pfam Ankyrin repeats (3 copies) 31 105 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00898 Bach-Chr4 6007575 6009439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00898 42 165 Acyl Lipid Metabolism Gene Families AT5G53470 33.871 3.72e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00898 - - qsu:112009352 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00898 4 6007575 6009439 Bach4g00898 4 6007575 6009439 ECH