Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00818 ATGATCCTGACTGAAGCTCCACGACCAGCTTTGGAGGTTGTTTCGCCTATTACCGACTTTGATGGCGAGCATAAGGCCTTTGTATCGGTATTTGTTAGTGTTGGAAGCTGTTATGTAAAAGTAGTAGACGATGGAGCTGGTATCACTCGAGATGGACTGGTATTGGTGGGAGGAAGATATGCAACATCAAAATTCCTTAATTTGGCTGATCTGGATGCCACTAGTGGAAGCTTTGGTTTCCGGGGAGAAGCTTTAGCTTCCATTTCTGAAGTCTCTTTGTTGGAAATAGTGACAAGAACTTATGGAATTCCAAATGGATATCGCAAAGTACTGAAGGGTTGCAAGTGCTTATATCTTGGCATAGATGATGAAAGAAAGGAAGTAGGCACCACAGTTGTTGTCCGTGATTTATTTTACAACCAGCCAGTTCGGAGGAAGTATTTGCAATCCAGCCTAAAGAAGGTTTTGCAATCGGTCAAGAAATGTGTGCTGCGGCTTGCACTTGTGCGTCCAAATATATTGTATAAAGTTGTTGATATTGAAAGTGAGGATGAACTTCTTTGCACACATTCTTCTTCTTCTCCTCTGTCACTTCTATCTAGTGGCTTTGGGGTTGAGGTCTCAAGTTCTCTTCGTGAACTACATGTTCAGGATGATAACATAAAGCTATGTGGATACATATCCGGTCCCTGCAATAGTTTTTCCTTGAAGGCCTTGCAATATGTCTATATTAATTCACAGTTTGTTTGCAAAGGCCCAATTCATAAGCTTCTGAGTCAATTGGCTATTAGGTTTGAGCACCTCAATTCATGGAATGCTGATAATGGGTTCCAAGGCAAGAAAAGAACCAGATCTCAACCATGTCCAGCTTATTTCTTGAATTTAACTTGCCCCAGGTCTCTCTATGATATAACATTTGAACCGTCAAAGACTTATGTTCAATTCAAGGATTGGGCTCCTATTCTGGATTTCATTGAGATGGCCATCAAACAATTCTGGGAGGAAAATTTACCTCATGGAGAGTTCTCCAATCATGCCACTTACATGATACAAGCAGATAAGATGTGGAAGGGAGGTGATGTGATTTCATCAGACGCAGGTTTCTTTGGTGCTGACGTGTCAAATTGTAGAAACCAAAATGGCATGGATTGCCTTGACCTTTTCTCTTCTACTTCAGACAAGGTAACCGAAGACAACTATCAACTATCTGACCATGAAGATCTTACAACCTCCGTTGGTTACTTGCATAAGGGGACTGAGAAGTTAAAAGAGCAAGTTAAGAGAGACTTTCTTTGTCAGACTGATTACTCTAGTAATTCATTGAATGGCTCATATGCCAAATGCATGTTCACTTTGAATAAAAAGCACGATGAGCAGTGGATGCATGATAACAATGGTTTATCTGAAGAAGATTATTTCTTGGATGGTAAGTTTTCTGGTGAAGAAAGTTTCAAGGATAATGCAGCATTTGATGCACCAAGTTCTTCACATGGAAATAAATTCATTAAATATGGTACTGATGAGCTCTGTAATGATTTAAAGATCCACAGGAATATCCAAACGCCTTTTCTGAAGAGCTGCTCTAGACAAGGAAGTGTTCTGCAAGAGAAGTCCTTGTTTGTAAATGATGAAAATGAAGTCCTACGTGATAGCTTTGTGAGCAAGCAAAATTTGAGGGTGGATTGTGGCAGTGTTGAGGATTTATTTGTCCATACTTGTCCAGAAGTTGTCAAAAAACTTAACATGTCTAAAGATTCTGATATTCTCTCGAGAGCATTTGCTGAAGAAAATCTTCTCCTTTTAGATTCATGCTCAGCTGCACAAATGGGAGGCTCTGGATCTGATCATCAATTATTGGATTCAGAATGGTATTCTGTTGACCCTGAACCGTTATCCCTAGCCACTCCATGGGATGTTGATCATATGTCTGATCACAATGATATTGAAGGAATGTCTAGATACCATAAAATGGATTCCTATGTGAACCTTCGTGTTGATGAAGAAAATGAATGCAACTTAAGTTACAAGAGATCAAGGATCTCCAGCCAAGACCACCGCTCCTCAAGTTTTGAGAAGACTGGATTTGATTTTGGCTGTCCTGATGATCCTAGTAAAATATCCTATGAATTTGTTGACCAGCCTGATTGCAGGGATATATATCCTACAAAATGGTCAGATATTTCAACTGACGAGTCAGATTGGTTGTGTCTAGAGTTGGATAGAGAAAAGTTCCAGAGACTTGGCAAGAACAGAGGCAGAAGGGATCCTTTTAGACATTCAACTTTTGAGAAGAAACATGCTAGAAGAAGCTTTTCAGCTCCTCCATTTTGTAGAAGGAAAAGACGATTTGTTTCTTCTAATCAACCTTCAATATTCATAGCTAGAACACCTACTGGTCAAACATATAACCGTGTCCTAAATCATGGAGGAGCTTATGAGTTTAAGCATCCCAAACAATCTTCTGGTCCACTTCAGCTAAGCACTGAGGAGCAGTTATTGCCAAAAATCATACCTAATGTGGGAAAGAGACCAGAAGTTTTTGCAGATACGGAGAAGAATGACAACATGCTTGATACTCAAAGTAATATACTTGACATCTCTGCTGGGTTCTTGCATCTTGCTGGTGATTCATTGATACCTGAAAGTATCAGTAAGAACTCCCTGGAGGATGCCAAAGTTCTCAATCAAGTGGATAAGAAATTCATTCCAATTGTGGCTGGCAGAACCCTTGCTATTATAGATCAGCATGCTGCAGATGAAAGAATCAGACTGGAAGAACTGCGTCAAAAGGTGTTATCTGGAGAAGCGAAGACAATATCCTATCTAGATGCTGAAAAAGAATTGGTGCTGCCGGAGATAGGCTATCAACTACTGCATAATTATGCTGAACAGGTTAAAGATTGGGGCTGGATCTGCAACATTCATACTCAAGATTCGAAGTCTTTTAAAAGGAATTTGGATATTCTCAACAGGCAGCCGATGGTCGTCATACTTATTGCGGTACCCTGCATTTTAGGTGTCAAATTAAATGATGTTGATCTTATGGAATTTCTCCAGCAGCTTGCTGACACGGATGGATCATCAACATTGCCACTCTCTGTAATACGAGTCCTAAATATGAAGGCGTGCAGAGGTGCAATTATGTTCGGGGACTCCTTGCTACCATCAGAATGTTCCCTTCTTGTTGAGGAGCTAAAGCATTCGTCACTTTGTTTCCAATGTGCTCATGGGCGGCCAACAACCGCTCCTCTAGTCAACTTGGAGGCGCTACATAGTCAGATAGCAAAGCTCGGACTAATGAATGATTCCTCAAACGATGAGTGGCACGGATTACGGAGGCATGAAGTCTGTGTTGAACGTGCAGCACAGCGTTTATGTTCCGCCGAAGCAGAGTGTTGA 3399 0.4078 MILTEAPRPALEVVSPITDFDGEHKAFVSVFVSVGSCYVKVVDDGAGITRDGLVLVGGRYATSKFLNLADLDATSGSFGFRGEALASISEVSLLEIVTRTYGIPNGYRKVLKGCKCLYLGIDDERKEVGTTVVVRDLFYNQPVRRKYLQSSLKKVLQSVKKCVLRLALVRPNILYKVVDIESEDELLCTHSSSSPLSLLSSGFGVEVSSSLRELHVQDDNIKLCGYISGPCNSFSLKALQYVYINSQFVCKGPIHKLLSQLAIRFEHLNSWNADNGFQGKKRTRSQPCPAYFLNLTCPRSLYDITFEPSKTYVQFKDWAPILDFIEMAIKQFWEENLPHGEFSNHATYMIQADKMWKGGDVISSDAGFFGADVSNCRNQNGMDCLDLFSSTSDKVTEDNYQLSDHEDLTTSVGYLHKGTEKLKEQVKRDFLCQTDYSSNSLNGSYAKCMFTLNKKHDEQWMHDNNGLSEEDYFLDGKFSGEESFKDNAAFDAPSSSHGNKFIKYGTDELCNDLKIHRNIQTPFLKSCSRQGSVLQEKSLFVNDENEVLRDSFVSKQNLRVDCGSVEDLFVHTCPEVVKKLNMSKDSDILSRAFAEENLLLLDSCSAAQMGGSGSDHQLLDSEWYSVDPEPLSLATPWDVDHMSDHNDIEGMSRYHKMDSYVNLRVDEENECNLSYKRSRISSQDHRSSSFEKTGFDFGCPDDPSKISYEFVDQPDCRDIYPTKWSDISTDESDWLCLELDREKFQRLGKNRGRRDPFRHSTFEKKHARRSFSAPPFCRRKRRFVSSNQPSIFIARTPTGQTYNRVLNHGGAYEFKHPKQSSGPLQLSTEEQLLPKIIPNVGKRPEVFADTEKNDNMLDTQSNILDISAGFLHLAGDSLIPESISKNSLEDAKVLNQVDKKFIPIVAGRTLAIIDQHAADERIRLEELRQKVLSGEAKTISYLDAEKELVLPEIGYQLLHNYAEQVKDWGWICNIHTQDSKSFKRNLDILNRQPMVVILIAVPCILGVKLNDVDLMEFLQQLADTDGSSTLPLSVIRVLNMKACRGAIMFGDSLLPSECSLLVEELKHSSLCFQCAHGRPTTAPLVNLEALHSQIAKLGLMNDSSNDEWHGLRRHEVCVERAAQRLCSAEAEC 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00818 1132 Gene3D - 200 339 IPR014721 -
Bach4g00818 1132 SMART DNA_mis_repair_2 199 334 IPR013507 GO:0005524|GO:0006298|GO:0030983
Bach4g00818 1132 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 30 184 IPR036890 -
Bach4g00818 1132 Pfam DNA mismatch repair protein, C-terminal domain 203 332 IPR013507 GO:0005524|GO:0006298|GO:0030983
Bach4g00818 1132 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 28 1089 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Bach4g00818 1132 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 79 85 IPR014762 -
Bach4g00818 1132 FunFam MUTL protein homolog 3 937 1048 - -
Bach4g00818 1132 SMART MutL_C_2 893 1053 IPR014790 GO:0005524|GO:0006298
Bach4g00818 1132 SUPERFAMILY DNA mismatch repair protein MutL 891 1084 IPR037198 -
Bach4g00818 1132 Gene3D - 896 1082 IPR042120 -
Bach4g00818 1132 Gene3D - 937 1048 IPR042121 -
Bach4g00818 1132 SUPERFAMILY Ribosomal protein S5 domain 2-like 183 334 IPR020568 -
Bach4g00818 1132 Gene3D - 22 193 IPR036890 -
Bach4g00818 1132 Pfam MutL C terminal dimerisation domain 892 1053 IPR014790 GO:0005524|GO:0006298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00818 Bach-Chr4 5434305 5444554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00818 K08739 - gmx:100788019 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00818 4 5434305 5444554 Bach4g00818 4 5434305 5444554 ECH