Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00677 ATGCCACAAATTGCAATTGGTAATAAAAGTCGGAACTTATTTATTTCTGATTCTCTGTTGATAAAATATAACTCTCATGTTATGCTTGCAGCTCTTGATCGACCTGACGGGGCTGGGTCTTTGAAGAGGAAATCGTTCAATGCCTCATCCAAGTTTAGGAGTTCTTTAGCAAGAAAAGGCAGAAGAAGTAGCAAGGTCATGTCCATTGAATTTGATGACGTCCATGATTCTGAGGAGATGGTAGCTGTTGATGCTTTTCGTCAAGCTCTTGTACTGGAGGAACTATTGCCTGGAAAGCATGATGATTATCATATGATGCTCAGATTCCTGAAGGCCAGGAAATTTGATATGGAGAAAACAAAGCAAATGTGGTCTGACATGCTCCAATGGAGAAAGGAATTTGGTGCTGACACAATTACGGAGGATTTTGAATTTAAGGAACTCAGTGAAGTCTTGCAATATTATCCCCAAGGGCATCATGGAGTAGATAAAGATGGACGACCTGTGTACATTGAGAGGTTAGGCCAAGTAGACCCCACCAAGCTGATGCAAGTAACAACTATGGATCGCTATGTCAGATACCATGTTATGGAGTTTGAGAGGACATTCAATGTCAAGTTCCCAGCTTGTTCGATTGCTGCAAGGAAGCACATTGATCAAAGTACAACCATTTTGGATGTGCAAGGAGTGGGCCTGAAGAACTTCAATAAAGCTGCCAGGGAACTCATTACCCGTCTTCAGAAGATTGATGGTGACAATTACCCAGAAACCTTGAATCGCATGTTCATCATCAACGCAGGTTCTGGATTCAGGATGCTGTGGAATACCGTGAAGTCCTTCCTTGATCCCAAGACCACATCAAAAATCCATGTTCTTGGTAATAAGTACCAGAGCAAATTGCTTGAAATAATTGATGCAAGTGAATTGCCAGAGTTTTTAGGAGGTACTTGTACCTGTGCTGATCAAGGAGGTTGTATGCGTTCTGATAAGGGTCCGTGGAAGGATGCAGAAATAATGAGGAAGGTTCAGAATGGTGAGCATAAATGTTCAGTAAAAAGGGAGTCTCAGGCCGTGGAAGAAAAAACAATTTCTCAGGATGAGGTTGCGGTTCCAAAGGTCCCTGCTACTAAAGCTTGCAACTACGAGGACTTTGTCCCAGCTGCTGATAAAACAGTAGAAACATGGAAAATAGTTGAGCGCAAGTTGTCCTCAAACAATGACGTATATTATTACGCCATGGCTGATTCATGCAAGATTCACGAAAGAGTGAATTACCAGATTTTCACTGGCCTTATGGCCTTTGTTATGGGCATCCTCACCATGGTCAGAATGACACGAAACATGCCCAAGAAGCTCACTGATGCCAACTTCTACTCCAATTCCGTTTATTCTGATGACACAATGATTAACGGGCAGGTTCCTTCTGACCAATTCCCTGCCCATGGCATCTCTCCTGCAGAGTACGTGGCTGTGATGCAACGCATGGCTGAGTTGGAAGAGACAATGATCAATAATATTAATAGACCTATCACCATGCCACCTGAGAAAGAGGAAATGCTGAATGCTGCTATAAGCCGAGCTGATGCATTGGAACAGGAACTCATGGCGACCAAGAAGGCTTTGGAGGATTCACTTTCCAAACAAGAGGAGCTTTCAGCTTATATTGAGAAAAAGAAGAAGAAGAAGAAGATGTTACTCTGGTAA 1704 0.4272 MPQIAIGNKSRNLFISDSLLIKYNSHVMLAALDRPDGAGSLKRKSFNASSKFRSSLARKGRRSSKVMSIEFDDVHDSEEMVAVDAFRQALVLEELLPGKHDDYHMMLRFLKARKFDMEKTKQMWSDMLQWRKEFGADTITEDFEFKELSEVLQYYPQGHHGVDKDGRPVYIERLGQVDPTKLMQVTTMDRYVRYHVMEFERTFNVKFPACSIAARKHIDQSTTILDVQGVGLKNFNKAARELITRLQKIDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDAEIMRKVQNGEHKCSVKRESQAVEEKTISQDEVAVPKVPATKACNYEDFVPAADKTVETWKIVERKLSSNNDVYYYAMADSCKIHERVNYQIFTGLMAFVMGILTMVRMTRNMPKKLTDANFYSNSVYSDDTMINGQVPSDQFPAHGISPAEYVAVMQRMAELEETMINNINRPITMPPEKEEMLNAAISRADALEQELMATKKALEDSLSKQEELSAYIEKKKKKKKMLLW 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00677 567 SMART CRAL_TRIO_N_2 102 127 IPR011074 -
Bach4g00677 567 CDD SEC14 148 316 IPR001251 -
Bach4g00677 567 SUPERFAMILY CRAL/TRIO N-terminal domain 76 143 IPR036273 -
Bach4g00677 567 Coils Coil 520 551 - -
Bach4g00677 567 PRINTS Cellular retinaldehyde-binding protein signature 307 316 - -
Bach4g00677 567 PRINTS Cellular retinaldehyde-binding protein signature 274 293 - -
Bach4g00677 567 PRINTS Cellular retinaldehyde-binding protein signature 105 127 - -
Bach4g00677 567 Pfam CRAL/TRIO, N-terminal domain 99 126 IPR011074 -
Bach4g00677 567 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 147 321 IPR001251 -
Bach4g00677 567 Pfam CRAL/TRIO domain 153 315 IPR001251 -
Bach4g00677 567 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 38 559 - -
Bach4g00677 567 SUPERFAMILY CRAL/TRIO domain 147 341 IPR036865 -
Bach4g00677 567 Gene3D - 135 347 IPR036865 -
Bach4g00677 567 Gene3D - 63 134 - -
Bach4g00677 567 SMART sec14_4 147 318 IPR001251 -
Bach4g00677 567 FunFam SEC14 cytosolic factor 135 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00677 Bach-Chr4 4499830 4504417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00677 77 312 Acyl Lipid Metabolism Gene Families AT5G47730 29.412 1.43e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00677 K26544 - gmx:100785716 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00677 4 4499830 4504417 Bach4g00677 4 4499830 4504417 ECH