Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00570 ATGACAGGGTCATCAAGAGGAGGCCACATATTTTACGATGACAACAGTGTCCAAGGACGAAAGTTTGGCAAGTTGAAAGACAATTACCTTGATGGTTATAACTCCGATAATGTTATAAGAAAATCCCATGCTTCTAAAACTGATCTAGAACCTTCGATGGCCTCAGACAATTCTCCATGCGAGTCATCATTATCTCCTTTATCCAAGTCTCCTTGGTCTCACGTTAATGCTTCTAATTCCCCAATCGGCACCGCAGAGAATTCTGCGTGTAACATTCTAGTCGGCTCATTAATTCGAGAAGAAGGCCACATATGCTCACTTGCGGCTACCAAAGATTTGTTATACACCGGATCCGATAGCAAGAACATTCGGGTTTGGAAGAACCAAACCGAATTCTGTGGATTCAAATCGAATAGCGGTTTGGTTAAAGCAATTGTTATTGCGGGTGAGAAAATCCTAACGGGTCATCAAGATGGGAGGATCCGGGTTTGGAAAGTCTCAAGGAAGCGGGAGGACCAGCACAAGCGCGTAGCAACATTACCGACTCTAAGAAATTATATTAGATGTTCCATGAAGCCTAGCAATTACGTAGAAGTGAAACGTAACCGTAACATGCTTTGGATCAAACACTACGACGCCATCTCGTGTCTTGCCTTAACAGAAGACCATTCCCTTATTTACTCAGCTTCTTGGGATAAGACATTCAAAGTTTGGCGAGCATCAAATTACAAGTGCTTGGAATCTGTGACTGCTCATGACGAGGCCATTAACGCTTTGGTCCTGGGATTCGATGGATTAGTATTCACGGGTTCGGCGGACGGCACCGTCAAGATTTGGCGGAGGGAGGTACAAGGAAAAGGAACGAAACATTTCTTTTCACAGACGTTGTTGAAGCAAGAGTGTGCTGTGACGGCGTTAACCATAAACTCAGAAGGGACATTTTTATATGCTGGATCTTCTGAGGGGCTAATTAACTATTGGGAACAAGGGGACACTCTGAAGCATGGTGGCATTTTGAGAGGCCACAAGTTAGCGGTTCTATGCTTGGCCACGGCTGGGAGCCTTGTATTCAGTGGATCTGCTGATATGGGAATATGCGTGTGGAGGAGATCCACAAATGAGCATACTTGCGTGTCGGTTTTGACAAGCCACACTGGTCCAGTGAAGTGCTTAGCAGTGGAGAAAGACCTTGAAGCAAAGGCTGGTGACCGATGCTGGATATTATACAGTGGGAGTTTGGACAAGTCAGTTAAGGTGCGGAAGGTCTCAGAGCAAGCACCGGTTACCGTGCAAAACCAACCGCCACGTCAAAGTATTGATGTTTATCAGGCGCCGGTTTCCAGACTAGCATCCATGCGAAAAATGGGGTCCAGAAGATACTGA 1383 0.457 MTGSSRGGHIFYDDNSVQGRKFGKLKDNYLDGYNSDNVIRKSHASKTDLEPSMASDNSPCESSLSPLSKSPWSHVNASNSPIGTAENSACNILVGSLIREEGHICSLAATKDLLYTGSDSKNIRVWKNQTEFCGFKSNSGLVKAIVIAGEKILTGHQDGRIRVWKVSRKREDQHKRVATLPTLRNYIRCSMKPSNYVEVKRNRNMLWIKHYDAISCLALTEDHSLIYSASWDKTFKVWRASNYKCLESVTAHDEAINALVLGFDGLVFTGSADGTVKIWRREVQGKGTKHFFSQTLLKQECAVTALTINSEGTFLYAGSSEGLINYWEQGDTLKHGGILRGHKLAVLCLATAGSLVFSGSADMGICVWRRSTNEHTCVSVLTSHTGPVKCLAVEKDLEAKAGDRCWILYSGSLDKSVKVRKVSEQAPVTVQNQPPRQSIDVYQAPVSRLASMRKMGSRRY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00570 460 CDD WD40 101 419 - -
Bach4g00570 460 SUPERFAMILY WD40 repeat-like 108 431 IPR036322 GO:0005515
Bach4g00570 460 Gene3D - 295 456 IPR015943 GO:0005515
Bach4g00570 460 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 55 426 IPR045182 -
Bach4g00570 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 207 248 IPR001680 GO:0005515
Bach4g00570 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 249 279 IPR001680 GO:0005515
Bach4g00570 460 Gene3D - 204 294 IPR015943 GO:0005515
Bach4g00570 460 SMART WD40_4 90 127 IPR001680 GO:0005515
Bach4g00570 460 SMART WD40_4 289 328 IPR001680 GO:0005515
Bach4g00570 460 SMART WD40_4 201 239 IPR001680 GO:0005515
Bach4g00570 460 SMART WD40_4 332 369 IPR001680 GO:0005515
Bach4g00570 460 SMART WD40_4 374 421 IPR001680 GO:0005515
Bach4g00570 460 SMART WD40_4 128 165 IPR001680 GO:0005515
Bach4g00570 460 SMART WD40_4 242 280 IPR001680 GO:0005515
Bach4g00570 460 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 249 279 - -
Bach4g00570 460 FunFam BnaA09g28200D protein 197 284 - -
Bach4g00570 460 MobiDBLite consensus disorder prediction 48 70 - -
Bach4g00570 460 Pfam WD domain, G-beta repeat 210 238 IPR001680 GO:0005515
Bach4g00570 460 Pfam WD domain, G-beta repeat 101 127 IPR001680 GO:0005515
Bach4g00570 460 Pfam WD domain, G-beta repeat 376 419 IPR001680 GO:0005515
Bach4g00570 460 Pfam WD domain, G-beta repeat 244 279 IPR001680 GO:0005515
Bach4g00570 460 MobiDBLite consensus disorder prediction 45 70 - -
Bach4g00570 460 Gene3D - 82 203 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00570 Bach-Chr4 3838913 3840295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00570 133 454 Acyl Lipid Metabolism Gene Families AT3G18860 27.246 2.06e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00570 - - gmx:100819990 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00570 4 3838913 3840295 Bach4g00570 4 3838913 3840295 ECH