Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00549 GTCCTCCTGGCCTCCTCCCCTCACCTTCCCAATCCCCCACCTGCTGATCTTAAAAATCCTTTTGGTCCTCTCAGCAACCTGAACTGAGTCACCAACTGCAACTCACCTTACATTTTTCTCAAAAATGGTATCCGAATCGGAGCTAATCGGCCGGCTTAGGGAGTTTCTTCGGAGCGCCGACCTCAACACCACCACCACTGCTACCGTCCGCCGGCAGCTGGAGAATGATTTTGGAATCGATTTATCGGATAGGAAGGCATTCATAAGAGAACAGGTGGACTTGTTTCTTCAAAGCGAGCACTACCAAGCCGATGAAGCTGAGGAAGATGGCCAGCAAGAACCAGAAGAGGACGCAGAAGACGAAGAAGATCAAAAGGTCGAGGCAAAATCGGAGGAAAGTGAAGGAACTGATTCGAAACAGGAAACGGATGACGATGAAGAAGAAGATGATGAAAAAGTCAAGCATGCAAAGATTGGGAAGCATAAAAACCGATCCAACAAGGTAAGTAATGAGGTAAAGAAAAGAGGTGGTGGTTTCTGTAAATTATGTAGCCTCTCCCCACAACTTCAGGAATTCGTTGGAGTGCCAGAAATGGCCAGGACTGAGGTTGTTAAGCAATTATGGGCCTATATCAGGGAGAAAAATTTGCAGGACACAAATAACAGGAGAAATATAATTTGTGATGAACCATTGCGTGCCCTTTTTGGCGTTGATTCCATCAACATGTTTCAAATGAACAAGGCCTTGTCAAAGCATATCTGGCCATTGGATTCAGATGATGTTGTCCAAGTGAAGTCAGCAACGAAGGAAAAGCAGAAGAGGCAAGTGAAAGAAGAAGATCCAGATGAAACAAAAAGGAAAGAAAAACGGCAGAAGGGAGGAAAATCAGGTTTTTGTGCTCCTCTTCCACTTTCTGATGCTCTTGTGAACTTCCTTGGAACTGGAGAAAGTGCATTATCACGGAGTGATGTCATAAAAAGAATGTGGGATTATATGAAAGGAAACAATCTCCAGGATCCTTCCGACAAGAGGAAAATAATATGTGACGAGAAGCTGAAAGAACTCTTCAATGTTGACTCGTTTAATGGCTTCACAGTTACAAAACTACTTGCCCCTCATTTCATAAAGACAGAGCAGTGA 1141 0.4408 MVSESELIGRLREFLRSADLNTTTTATVRRQLENDFGIDLSDRKAFIREQVDLFLQSEHYQADEAEEDGQQEPEEDAEDEEDQKVEAKSEESEGTDSKQETDDDEEEDDEKVKHAKIGKHKNRSNKVSNEVKKRGGGFCKLCSLSPQLQEFVGVPEMARTEVVKQLWAYIREKNLQDTNNRRNIICDEPLRALFGVDSINMFQMNKALSKHIWPLDSDDVVQVKSATKEKQKRQVKEEDPDETKRKEKRQKGGKSGFCAPLPLSDALVNFLGTGESALSRSDVIKRMWDYMKGNNLQDPSDKRKIICDEKLKELFNVDSFNGFTVTKLLAPHFIKTEQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00549 338 CDD SWIB-MDM2_like 261 333 - -
Bach4g00549 338 FunFam Upstream activation factor subunit 132 220 - -
Bach4g00549 338 Gene3D SWIB/MDM2 domain 251 338 IPR036885 -
Bach4g00549 338 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 1 56 IPR014876 -
Bach4g00549 338 SMART swib_2 138 217 IPR019835 -
Bach4g00549 338 SMART swib_2 257 338 IPR019835 -
Bach4g00549 338 MobiDBLite consensus disorder prediction 224 256 - -
Bach4g00549 338 SUPERFAMILY DEK C-terminal domain 3 56 - -
Bach4g00549 338 Gene3D SWIB/MDM2 domain 132 220 IPR036885 -
Bach4g00549 338 Gene3D - 1 59 - -
Bach4g00549 338 CDD SWIB-MDM2_like 142 212 - -
Bach4g00549 338 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 6 217 - -
Bach4g00549 338 Pfam DEK C terminal domain 2 55 IPR014876 -
Bach4g00549 338 ProSiteProfiles SWIB/MDM2 domain profile. 256 335 IPR003121 -
Bach4g00549 338 SUPERFAMILY SWIB/MDM2 domain 254 337 IPR036885 -
Bach4g00549 338 MobiDBLite consensus disorder prediction 67 86 - -
Bach4g00549 338 ProSiteProfiles SWIB/MDM2 domain profile. 137 214 IPR003121 -
Bach4g00549 338 SUPERFAMILY SWIB/MDM2 domain 134 216 IPR036885 -
Bach4g00549 338 MobiDBLite consensus disorder prediction 224 253 - -
Bach4g00549 338 Pfam SWIB/MDM2 domain 260 333 IPR003121 -
Bach4g00549 338 Pfam SWIB/MDM2 domain 141 212 IPR003121 -
Bach4g00549 338 MobiDBLite consensus disorder prediction 59 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00549 Bach-Chr4 3728896 3733557 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bach4g00549 SWIB 2.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00549 K15223 - gmx:100786835 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00549 4 3728896 3733557 Bach4g00549 4 3728896 3733557 ECH