LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00359	ATGACAGCGTCTTGTGAGAATTGCGTGGAAAGTAACACTTCTCTCGCCGGGCTTGCTCCACTTGAAGCTGTGCTATTTGATATTGATGGAACTCTTTGTGATTCAGATCCTCTCCATTACTTTGCTTTCCGTGAAATGCTTCAAGAGATTGGCTTCAATGGAGGTGCTCCAATAACAGAGGAATTTTTTATTGAAACTGTTGCCGGCAAACACAATGATGATATTGCCTTGGCTCTCTTTCCTGGTGATCTGGAGAGGGGTTTGAAGTTTGTAGATGACAAGGAAGCCATGTTTCGCAGATTGGCAGCTGCGCAATTGAAGCCTTTGAATGGCCTTTATAAAGTGAGGAAATGGATTGAAGATAGAGGCTTGAAGCGGGCTGCAGTTACTAATGCACCAAGACCAAATGCAGAACTTATGGTCAAAATCCTTGGTCTTTCAGATTTTTTTGATGCTGTTATTATTGGAGGTGAATGTGAACATGCTAAGCCCCATCCAGATCCCTACTTGAAAGCTCTTGAAGTGCTGAAAGCATCGAAAGATCACACTTTTGTATTTGAGGATTCCGTTTCAGGGATAAAAGCTGGAGTGGCTGCTGGAATGCCTGTTGTAGGTATAACTACCAGAAATCCGGAGCACTTACTAATGGAAGCAAGGCCTGCTTTTCTAATTAAGGATTATGATGATCCAAAACTTCGGGGGGCTTTGGAAGAACTTGACAACGCTGGTGGTCAAAAATCTTGAACCACCTCATGTTAGAATGCAGGAGATCTATCTTCGTAAGAATAAGATACAAGTAGAAATTTCATACAAACTCAATCAATCTGATGATTTTGCTGTATAGGAGCCTTTTGCTTCTCAGCAATATTAATACTAATAATAGTGTTAATTAGCTAAGTTAGGCTATCCGTATTTGCACTAGAAAACATGACAAATTGATCAAATGTCATTCTTGCTCAAGCCCAGGGAAATTCTTTACAAAAAACAAATGGTATTCACCTTCCTCCCACTTTATACTTCTATGTGACAGTCTTCTAGTACATCTATGATCCTCAAAGATGCTATTATGTATACCATGTGCGGATAAGAGACATCACATAACTACTAATTGTAAAATTTATGTAATAACTGATAAATCGTAACAAGCATGTTGAAGCAGATATACGTACGCAAGCTCTGATCCGACTTCAAGGAAAA	1197	0.396	MTASCENCVESNTSLAGLAPLEAVLFDIDGTLCDSDPLHYFAFREMLQEIGFNGGAPITEEFFIETVAGKHNDDIALALFPGDLERGLKFVDDKEAMFRRLAAAQLKPLNGLYKVRKWIEDRGLKRAAVTNAPRPNAELMVKILGLSDFFDAVIIGGECEHAKPHPDPYLKALEVLKASKDHTFVFEDSVSGIKAGVAAGMPVVGITTRNPEHLLMEARPAFLIKDYDDPKLRGALEELDNAGGQKS	247

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00359	247	PRINTS	Haloacid dehalogenase/epoxide hydrolase family signature	21	32	IPR006439	-
	Bach4g00359	247	PRINTS	Haloacid dehalogenase/epoxide hydrolase family signature	119	132	IPR006439	-
	Bach4g00359	247	PRINTS	Haloacid dehalogenase/epoxide hydrolase family signature	150	166	IPR006439	-
	Bach4g00359	247	Pfam	Haloacid dehalogenase-like hydrolase	24	205	IPR041492	-
	Bach4g00359	247	SFLD	Haloacid Dehalogenase	21	228	-	-
	Bach4g00359	247	SUPERFAMILY	HAD-like	19	238	IPR036412	-
	Bach4g00359	247	CDD	HAD_BPGM-like	23	208	-	-
	Bach4g00359	247	SFLD	C1.5.6: HAD, Beta-PGM, Phosphatase Like	21	228	-	-
	Bach4g00359	247	Gene3D	-	22	229	IPR023214	-
	Bach4g00359	247	Gene3D	Putative phosphatase; domain 2	36	104	IPR023198	-
	Bach4g00359	247	PANTHER	6-PHOSPHOGLUCONATE PHOSPHATASE	22	240	-	-
	Bach4g00359	247	NCBIfam	HAD-IA family hydrolase	96	206	IPR006439	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00359	Bach-Chr4	2388990	2391687	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00359	-		-	gmx:100793483	423.705