Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00354 TGTCTCTCCATCCCCAAACTTGTTCGCTTCATTCCTTAATCCTTACACCAAACCCTAACCATAATCATAACCCCTTGCACTTTCACAAACTAAGGAAAGCAATATTTTAAAACCCTAACCCCAACTAATTCAATTAATACTCAGAAGATCACACCGTCGTCGTTCCATTTTGAAAATTCTTGCTTGCGATGGACTCACAACAGGGCAATCTATTCGAAACCGCTTCGCAACCCGACACTGGCAACGACGCCTACACTTTTTTAGAATTTAACACCCAGGGGGAGGATTTCGACTACCCGGAATTCCGTGACCCGATTAGGTCAACATGGCCTACTCCGTCCGATTCACTCTCTGAACCTACCGAACGTGGTGGTGCAGCTGGCGCTGGGTCTGATCACCATTCCGATGCCTCACCCATTTCTGCGGCACCGGGAAGCGCCACTAAAAGCCGGGCAGCTGGGTCGGGTAGCAGCAGCGGCAACAGCCAGATGGTGGACGCCTTGGCGGCTGGGATGAGCGGCTTAAATTTTGAAGATACCGCGGATGATGAGAATTACGAGTACGGTAAAGGAGATTTCACTGAACATGCGTGCCGGTATTGTGGGGTGTCGAACCCGTCTTGTGTTGTGAGGTGTAATGTACCATCGTGTCGCAAATGGTTCTGCAATTCCAGGGGTAACACATCGGGTTCACATATTGTTAATCACCTGGTCCGAGCAAAACATAAAGAAGTCTGTCTTCACAAAGATAGTCCTTTGGGAGAAACAATCCTTGAATGCTACAACTGTGGCTGTCGTAATGTGTTTCTCCTTGGATTTATTTCTGCCAAGACAGAAAGTGTGGTTGTACTTCTTTGTCGGGAGCCTTGCTTGAGTGTTAACGCATTGAAGGACATGAATTGGGACCTCAGCCAATGGTGTCCACTGATTGATGATAGGTGTTTCTTGCAGTGGCTTGTCAAGATCCCAACTGAACAGGAGCAATTGAGAGCACGTCAGATAAGTGCGCAGCAAATAAATAAGGTAGAAGAGCTTTGGAAGACAAATCCTGATGCTTCTCTTGAGGATCTTGAGAAGCCTGGCGTGGATGATGAACCTCAGCCTGTGGCTTTGAAATATGAGGATGCATATCAGTATCAAAATGTGTTTGCACCCCTTATCAAGCTTGAAGCCGATTATGATAAGACGATGAAAGAATCACAAAGCAAGGACAATGTTACAATCAGATGGGATATTGGGCTTAATAAGAAGCGCATTGCATACTTTGTCTTCCCAAAGGAAGATAATGAATTGCGGCTTGTACCTGGTGATGAGTTACGGTTGCGTTATTCTGGAGATGCTGCACATCCGGCGTGGCAGTCAGTGGGGCATGTGACAAAGCTAACTGCACAAGAGGAGGTTGCACTTGAGCTTCGTACAAGTCAGGGTGTACCAGTTGATGTAACCCATGGTATCAGTGTTGATTTTGTATGGAAGAGTACAGGCTTTGACAGGATGCAAGGAGCTATGAAAACGTTTGCAGTTGATGAGACAAGTGTCAGTGGGTATATTTACCATCACTTGTTGGGTCATGAAGTTGAGGTTCAGATGGTGCGAAATCCATTGCCACGTCGCTTTGGTGCGCCTGGACTTCCAGAGCTCAACGCATCCCAAGTTTTTGCAGTTAAGAGTGTTCTTCAGAGACCTATTAGTTTGATTCAAGGTCCTCCTGGAACTGGTAAGACTGTAACTTCTGCAGCAATTGTATATCACATGGCAAAACAAGGTCAGGGACAGGTTTTGGTTTGTGCCCCTAGTAATGTGGCTGTGGACCAGCTAGCTGAAAAGATCAGTGCTACTGGGTTAAAGGTTGTTAGGCTTTGTGCAAAATCAAGGGAAGCTGTTAGTTCTCCTGTTGAGCATTTAACTCTTCATTATCAGGTTCGGCATCTTGACACATCTGACAAAAGTGAACTTCACAAGTTACAACAGCTGAAAGATGATCAAGGGGAACTTTCCAGTAGTGATGAGAAAAAGTATAAAGCTTTAAAGCGAGCAACAGAAAGGGAGATTTCACAGAGTGCTGATGTGATCTGCTGCACTTGCGTTGGTGCTGGAGATCCTCGATTGGCTAACTTCAGGTTCCGCCAGGTACTTATTGATGAGTCCACTCAGGCAACAGAACCTGAATGTCTCATTCCCTTGGTTCTTGGGGCCAAGCAGGTTGTTCTTGTTGGTGACCACTGCCAGCTTGGTCCTGTTATCACTTGCAAGAAAGCAGCTCGTGCAGGTCTAGCACAATCACTTTTTGAACGCCTTGTTCTGCTTGGTGTCAAACCAATTAGATTGCAGGTTCAATACCGAATGCATCCATCTCTTTCTGAATTTCCCTCCAACAGCTTTTATGAAGGCACCCTACAAAATGGAGTCACTGTTAATGAAAGGCAATTATCAGGAATTGATTTTCCATGGCCTGTGCCAAACCGTCCCATGTTTTTTTATGTCCAGATGGGTCAAGAAGAGATAAGTGCAAGCGGAACATCTTATTTAAACAGGACTGAGGCTGCCAATGTTGAAAAGATTGTCACAACTTTCTTAAGGAGTGGTGTAGTCCCTAGTCAGATTGGTGTGATAACACCTTATGAAGGACAGAGAGCTTATATTGTGAACTATATGTCAAGAAATGGTGCTCTTAGGCAGCAACTTTACAAGGAGATTGAGGTTGCAAGTGTTGATTCTTTTCAAGGAAGGGAGAAAGACTACATTATTTTATCATGTGTTAGAAGTAATGAGCATCAGGGCATTGGATTTCTGAATGATCCTCGGAGGCTTAATGTTGCTTTGACACGAGCTAGATATGGTATTGTTATTCTGGGCAATCCCAAAGTTCTCAGTAAACAGCCTCTTTGGAACAGTTTATTGACGCACTATAAGGAACATGAATGCTTGGTTGAAGGGCCTTTGAATAACTTGAAGCAGAGTATGGTTCAGTTTCAGAAACCTAAGAAGATATACAACGATAGAAGGCTTTTTTATGGTGGTGGACCTGGAGTTGTGCCTAATGATAACTTGGGCTCTGGCCCAACATCAGATCGGAGGAGTAGCCGTGGAAGGGGATTTTATATACCTCCTGGCCCACCAAATGGAACCCATAAGCCTGGAGTGCATCCTGCTGGGTATGCAATGCCGAGAGTTCCACTGCCACCTTTCCATGGTGGTCCACAGTCTCAGCCATATGCCATTCCAACTCGTGGAGCTGTTCATGGACCTGTGGGGGCAGTTCCTCATGTCCCACCTCCAGGGAGTCGGGGTTTTGGGGCTGGCCGAGGTAATTCAGGTGCCCCAGTTGGCAGCAATAATCTCTTGCACCAGCAAGGCGCACAGCAGTCTATTGGGAATGTTGGATCTGCCTTTAACGTCCCAGCCCTTGAAAATCCCAACAGCCAGCCATCTGTTGGCGGTCCATTGTCTCAACCTGGGTTTGCAAATAATATGCCAGTTCAAGGGCCAAGCCAATCATTCCGAGATCAATTTTCTGTGGCAGGAATGTCCCAGGATTTCTTGGGTGATGACTTCAAAAGCCAGGGATCTCATGTTCCTTATCATGTTAATGATTTCTCCACACAGGCTTCTCAAAGTGGATATGCTCTTGATTATGCTACTCAAGGAGCACAAGGTGGATTTCCAGGGAACTTTCTGAACCAGAATTCTCAGGCTGGATATTCACGTTTTGGTTCTGGAAATGATTTTATGTCTCAGGACTATATGACTCATGGATCACAAGGTCTTTTCACTCAGGTTGGCTTCAACGAACCCTCACAAGATGATGCATCACAGAGCCATTTTGGTGTGGCTAATGCCAACCCTCTTCACTCGCAGGTAAAAATTGTTCGAAAGAGCATTACATGGAATGGTTTTGTCGAAAGGGTTGCCTGGGTTGGGATCGTGAAGAAGCAGGGCGGTTTACGATATGTTCTCGGAGGATGTTATACATTCGGCAGCAATCACCACCCTAATGAAGTTTCTGTACAGAAGGTGGTTAAGTGGTCAACTCTTTCAGCTCTTACCTGA 4049 0.4567 MDSQQGNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSTWPTPSDSLSEPTERGGAAGAGSDHHSDASPISAAPGSATKSRAAGSGSSSGNSQMVDALAAGMSGLNFEDTADDENYEYGKGDFTEHACRYCGVSNPSCVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPTEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKTMKESQSKDNVTIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVTKLTAQEEVALELRTSQGVPVDVTHGISVDFVWKSTGFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNPLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDDQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVITCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQLSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFYGGGPGVVPNDNLGSGPTSDRRSSRGRGFYIPPGPPNGTHKPGVHPAGYAMPRVPLPPFHGGPQSQPYAIPTRGAVHGPVGAVPHVPPPGSRGFGAGRGNSGAPVGSNNLLHQQGAQQSIGNVGSAFNVPALENPNSQPSVGGPLSQPGFANNMPVQGPSQSFRDQFSVAGMSQDFLGDDFKSQGSHVPYHVNDFSTQASQSGYALDYATQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMTHGSQGLFTQVGFNEPSQDDASQSHFGVANANPLHSQVKIVRKSITWNGFVERVAWVGIVKKQGGLRYVLGGCYTFGSNHHPNEVSVQKVVKWSTLSALT 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00354 1286 MobiDBLite consensus disorder prediction 1067 1103 - -
Bach4g00354 1286 PANTHER DNA2/NAM7 HELICASE FAMILY 238 998 IPR045055 -
Bach4g00354 1286 Pfam Type III restriction enzyme, res subunit 492 551 IPR006935 GO:0003677|GO:0005524|GO:0016787
Bach4g00354 1286 ProSiteProfiles Upf1 cysteine-histidine-rich (CH-rich) domain profile. 127 286 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Bach4g00354 1286 MobiDBLite consensus disorder prediction 1 98 - -
Bach4g00354 1286 MobiDBLite consensus disorder prediction 947 979 - -
Bach4g00354 1286 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 492 624 IPR014001 -
Bach4g00354 1286 Gene3D - 718 929 IPR027417 -
Bach4g00354 1286 CDD SF1_C_Upf1 719 908 IPR047187 -
Bach4g00354 1286 CDD DEXXQc_UPF1 483 718 - -
Bach4g00354 1286 CDD 1B_UPF1-like 339 426 IPR040812 -
Bach4g00354 1286 Pfam AAA domain 585 685 IPR041677 GO:0004386
Bach4g00354 1286 FunFam Regulator of nonsense transcripts 1 718 929 - -
Bach4g00354 1286 Gene3D - 569 621 - -
Bach4g00354 1286 CDD ZBD_UPF1-like 134 256 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Bach4g00354 1286 Pfam AAA domain 696 891 IPR041679 -
Bach4g00354 1286 Pfam RNA helicase (UPF2 interacting domain) 133 286 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Bach4g00354 1286 Gene3D - 447 717 IPR027417 -
Bach4g00354 1286 MobiDBLite consensus disorder prediction 1 26 - -
Bach4g00354 1286 MobiDBLite consensus disorder prediction 1021 1050 - -
Bach4g00354 1286 Pfam RNA helicase UPF1, 1B domain 338 427 IPR040812 -
Bach4g00354 1286 Gene3D - 339 427 - -
Bach4g00354 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 914 IPR027417 -
Bach4g00354 1286 MobiDBLite consensus disorder prediction 78 98 - -
Bach4g00354 1286 FunFam regulator of nonsense transcripts 1 homolog 339 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00354 Bach-Chr4 2356617 2367161 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00354 K14326 - gmx:100795594 2296.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00354 4 2356617 2367161 Bach4g00354 4 2356617 2367161 ECH